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WormBase Tree Display for Variation: WBVar00247070

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Name Class

WBVar00247070EvidencePaper_evidenceWBPaper00004703
NamePublic_nameWBVar00247070
Other_namesnp_Y39E4A[9]
Y39E4A.3a.2:c.*248_*249insG
Y39E4A.3a.1:c.*248_*249insG
HGVSgCHROMOSOME_III:g.12967973dup
Sequence_detailsSMapS_parentSequenceY39E4A
Flanking_sequencesggtctattttatttgttatacgccctattcaggacacaaaaatcgataaa
Mapping_targetY39E4A
Type_of_mutationInsertionC
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00004602From_analysisSNP_Wicks
AnalysisSNP_Wicks
StatusLive
AffectsGeneWBGene00012713
TranscriptY39E4A.3a.2VEP_consequence3_prime_UTR_variant
VEP_impactMODIFIER
HGVScY39E4A.3a.2:c.*248_*249insG
cDNA_position1544-1545
Exon_number5/5
Y39E4A.3a.1VEP_consequence3_prime_UTR_variant
VEP_impactMODIFIER
HGVScY39E4A.3a.1:c.*248_*249insG
cDNA_position1648-1649
Exon_number6/6
ReferenceWBPaper00004703
RemarkPredicted SNP: Psnp=0.9221 VarI1=C
Enzymes. SNP detectable only by sequencing.
[20040130 db] this Locus was previously named snp_Y39E4.9
[20040130 db] this Allele was previously named snp_Y39E4.9
[20090224 db] this Variation was previously named snp_Y39E4[9]
[20090224 db] original Wicks name : Y39E4A:17572..18765@495 Psnp=0.9221 VarI1=C
[20090224 db] original Wicks id : eam66f03.s1@259,c,59
MethodSNP_Wicks