WormBase Tree Display for Variation: WBVar00247058

WBVar00247058 Evidence: Paper_evidence: WBPaper00004703
  Name: Public_name: WBVar00247058
    Other_name: snp_Y39B6A[25]
      Y39B6A.2b.1:c.270+825del
      Y39B6A.2a.1:c.1407+825del
    HGVSg: CHROMOSOME_V:g.19197976del
  Sequence_details: SMap: S_parent: Sequence: Y39B6A
    Flanking_sequences: cagtgaaaaaattggaaaaaaaaaa ttaaaatttgatagaaattgggtta
    Mapping_target: Y39B6A
    Type_of_mutation: Deletion: A
    SeqStatus: Sequenced
  Variation_type: SNP
    Predicted_SNP
    Natural_variant
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00004602 From_analysis: SNP_Wicks
    Analysis: SNP_Wicks
    Status: Live
  Affects: Gene: WBGene00012665
    Transcript: Y39B6A.2a.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: Y39B6A.2a.1:c.1407+825del
        Intron_number: 8/9
      Y39B6A.2b.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: Y39B6A.2b.1:c.270+825del
        Intron_number: 2/2
  Reference: WBPaper00004703
  Remark: Predicted SNP: Psnp=0.9221 VarD1=A
    Enzymes. SNP detectable only by sequencing.
    [20040130 db] this Locus was previously named snp_Y39B6.25
    [20040130 db] this Allele was previously named snp_Y39B6.25
    [20090224 db] this Variation was previously named snp_Y39B6[25]
    [20090224 db] original Wicks name : Y39B6A:239618..240526@303 Psnp=0.9221 VarD1=A
    [20090224 db] original Wicks id : vl30h04.s1@226,-,59
  Method: SNP_Wicks