WormBase Tree Display for Variation: WBVar00247041
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WBVar00247041 | Name | Public_name | WBVar00247041 | ||
---|---|---|---|---|---|
Other_name | snp_Y39B6A[8] | ||||
Y39B6A.35.1:c.723+204A>C | |||||
HGVSg | CHROMOSOME_V:g.19000034A>C | ||||
Sequence_details | SMap | S_parent | Sequence | Y39B6A | |
Flanking_sequences | aaactgacgataaggagatgaaagagctcctggaggagacttttgttcgttttttcactgaaaatttggcttttctgcgaaaaaaaaatagatgaaaagagcatttttaacgatttttgaggcaatttccgctgaaaattcataaaaattccattgaaaatcgtgaattccctcgaaattgcgaaaaaaatcggcaattttggttaattttgagcgaaaatgtgattttgggcgctgcttagactac | aactacaagttttgggcgctgcttagactacaaactacaagttttgggcgctgctaactacataaaacttcgttttcgaccaaaatttcctaattttttctaaaaatcacttatttccgatagaaatttccgattttcaagccgaaatatgcgaaagttcaccgaaaatcacacatttctgggcaatttttcattattttcc | |||
Mapping_target | Y39B6A | ||||
Type_of_mutation | Substitution | A | C | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain (143) | |||||
Laboratory | QX | ||||
Person | WBPerson1730 | ||||
Analysis | SNP_Wicks | ||||
WGS_Andersen | |||||
History | Acquires_merge | WBVar01465756 | |||
Status | Live | ||||
Affects | Gene | WBGene00006567 | |||
Transcript | Y39B6A.35.1 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | Y39B6A.35.1:c.723+204A>C | ||||
Intron_number | 3/4 | ||||
Reference | WBPaper00040707 | ||||
WBPaper00004703 | |||||
Remark | Predicted SNP: Psnp=0.9887 VarS=AC | ||||
Enzymes. SNP detectable only by sequencing. | |||||
[20040130 db] this Locus was previously named snp_Y39B6.8 | |||||
[20040130 db] this Allele was previously named snp_Y39B6.8 | |||||
[20090224 db] this Variation was previously named snp_Y39B6[8] | |||||
[20090224 db] original Wicks name : Y39B6A:41398..42886@581 Psnp=0.9887 VarS=AC | |||||
[20090224 db] original Wicks id : yy45g02.s1@273,c,51 yx27h08.s2@800,a,12 | |||||
Method | SNP_Wicks |