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WormBase Tree Display for Variation: WBVar00247041

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Name Class

WBVar00247041NamePublic_nameWBVar00247041
Other_namesnp_Y39B6A[8]
Y39B6A.35.1:c.723+204A>C
HGVSgCHROMOSOME_V:g.19000034A>C
Sequence_detailsSMapS_parentSequenceY39B6A
Flanking_sequencesaaactgacgataaggagatgaaagagctcctggaggagacttttgttcgttttttcactgaaaatttggcttttctgcgaaaaaaaaatagatgaaaagagcatttttaacgatttttgaggcaatttccgctgaaaattcataaaaattccattgaaaatcgtgaattccctcgaaattgcgaaaaaaatcggcaattttggttaattttgagcgaaaatgtgattttgggcgctgcttagactacaactacaagttttgggcgctgcttagactacaaactacaagttttgggcgctgctaactacataaaacttcgttttcgaccaaaatttcctaattttttctaaaaatcacttatttccgatagaaatttccgattttcaagccgaaatatgcgaaagttcaccgaaaatcacacatttctgggcaatttttcattattttcc
Mapping_targetY39B6A
Type_of_mutationSubstitutionAC
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
Strain (143)
LaboratoryQX
PersonWBPerson1730
AnalysisSNP_Wicks
WGS_Andersen
HistoryAcquires_mergeWBVar01465756
StatusLive
AffectsGeneWBGene00006567
TranscriptY39B6A.35.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY39B6A.35.1:c.723+204A>C
Intron_number3/4
ReferenceWBPaper00040707
WBPaper00004703
RemarkPredicted SNP: Psnp=0.9887 VarS=AC
Enzymes. SNP detectable only by sequencing.
[20040130 db] this Locus was previously named snp_Y39B6.8
[20040130 db] this Allele was previously named snp_Y39B6.8
[20090224 db] this Variation was previously named snp_Y39B6[8]
[20090224 db] original Wicks name : Y39B6A:41398..42886@581 Psnp=0.9887 VarS=AC
[20090224 db] original Wicks id : yy45g02.s1@273,c,51 yx27h08.s2@800,a,12
MethodSNP_Wicks