WormBase Tree Display for Variation: WBVar00246996

WBVar00246996 Evidence: Paper_evidence: WBPaper00004703
  Name: Public_name: WBVar00246996
    Other_name: snp_Y38F2AL[9]
      cewivar00202545
      Y38F2AL.5.1:c.622+48A>G
    HGVSg: CHROMOSOME_IV:g.2327537T>C
  Sequence_details: SMap: S_parent: Sequence: Y38F2AL
    Flanking_sequences: ttagtaacaataaaaccacacatat aatggcgtatagttaagtgctacct
    Mapping_target: Y38F2AL
    Type_of_mutation: Substitution: T C
    SeqStatus: Sequenced
  Variation_type: SNP
    Predicted_SNP
    RFLP
    Natural_variant
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00004602 From_analysis: Million_mutation_project_reanalysis
    Analysis: SNP_Wicks
      Million_mutation_project_reanalysis
    Status: Live
  Affects: Gene: WBGene00021417
    Transcript: Y38F2AL.5.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: Y38F2AL.5.1:c.622+48A>G
        Intron_number: 6/7
  Reference: WBPaper00004703
  Remark: Predicted SNP: Psnp=0.9430 VarS=CT
    Enzymes. Bristol-specific: [AseI,AsnI,BpoAI,MseI,PshBI,Srl55DII,Srl65DI,Srl8DI,Sru4DI,Tru1I,Tru9I,VspI]. CB4856-specific [none].
    [20040130 db] this Locus was previously named snp_Y38F2AL.9
    [20040130 db] this Allele was previously named snp_Y38F2AL.9
    [20090224 db] original Wicks name : Y38F2AL:34781..35724@227 Psnp=0.9430 VarS=CT
    [20090224 db] original Wicks id : eam52a01.s1@155,c,62
    [20090224 db] Snip-SNP
  Method: SNP_Wicks