WormBase Tree Display for Variation: WBVar00246923

WBVar00246923 Evidence: Paper_evidence: WBPaper00004703
  Name: Public_name: WBVar00246923
    Other_name: snp_Y37A1B[4]
      Y37A1B.11c.1:c.1050-311dup
      Y37A1B.11b.1:c.1176-311dup
      Y37A1B.11a.1:c.1071-311dup
    HGVSg: CHROMOSOME_IV:g.14009579dup
  Sequence_details: SMap: S_parent: Sequence: Y37A1B
    Flanking_sequences: tcgaatttaaattttgaaaaaaaaa tttcaggggaactctaagtctcatc
    Mapping_target: Y37A1B
    Type_of_mutation: Insertion: A
    SeqStatus: Sequenced
  Variation_type: SNP
    Predicted_SNP
    Natural_variant
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00004602 From_analysis: SNP_Wicks
    Analysis: SNP_Wicks
    Status: Live
  Affects: Gene: WBGene00001190
    Transcript: Y37A1B.11a.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: Y37A1B.11a.1:c.1071-311dup
        Intron_number: 8/13
      Y37A1B.11c.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: Y37A1B.11c.1:c.1050-311dup
        Intron_number: 7/11
      Y37A1B.11b.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: Y37A1B.11b.1:c.1176-311dup
        Intron_number: 9/14
  Reference: WBPaper00004703
  Remark: Predicted SNP: Psnp=0.8888 VarI1=A
    Enzymes. SNP detectable only by sequencing.
    [20040130 db] this Locus was previously named snp_Y37A1B.4
    [20040130 db] this Allele was previously named snp_Y37A1B.4
    [20090224 db] original Wicks name : Y37A1B:36143..37126@283 Psnp=0.8888 VarI1=A
    [20090224 db] original Wicks id : eam47h08.s1@193,a,59 eam47h09.s1@207,a,62
  Method: SNP_Wicks