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WormBase Tree Display for Variation: WBVar00246919

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Name Class

WBVar00246919EvidencePaper_evidenceWBPaper00004703
NamePublic_nameWBVar00246919
Other_namesnp_Y37A1A[3]
cewivar00211444
Y37A1A.3.1:c.1317-23A>T
HGVSgCHROMOSOME_IV:g.13898242T>A
Sequence_detailsSMapS_parentSequenceY37A1A
Flanking_sequencescggctggaaacagggaattttgaagtagaaaatttttgcaaccaggaatg
Mapping_targetY37A1A
Type_of_mutationSubstitutionTA
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
RFLP
Natural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00004602From_analysisMillion_mutation_project_reanalysis
AnalysisSNP_Wicks
Million_mutation_project_reanalysis
StatusLive
AffectsGeneWBGene00012536
TranscriptY37A1A.3.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY37A1A.3.1:c.1317-23A>T
Intron_number7/9
ReferenceWBPaper00004703
RemarkPredicted SNP: Psnp=0.9427 VarS=AT
Enzymes. SNP detectable only by sequencing.
[20040130 db] this Locus was previously named snp_Y37A1.3
[20040130 db] this Allele was previously named snp_Y37A1.3
[20090224 db] this Variation was previously named snp_Y37A1[3]
[20090224 db] original Wicks name : Y37A1A:3401..4306@758 Psnp=0.9427 VarS=AT
[20090224 db] original Wicks id : yy44b08.s1@85,a,59
[20090224 db] Snip-SNP
MethodSNP_Wicks