WormBase Tree Display for Variation: WBVar00246919
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WBVar00246919 | Evidence | Paper_evidence | WBPaper00004703 | ||
---|---|---|---|---|---|
Name | Public_name | WBVar00246919 | |||
Other_name | snp_Y37A1A[3] | ||||
cewivar00211444 | |||||
Y37A1A.3.1:c.1317-23A>T | |||||
HGVSg | CHROMOSOME_IV:g.13898242T>A | ||||
Sequence_details | SMap | S_parent | Sequence | Y37A1A | |
Flanking_sequences | cggctggaaacagggaattttgaag | tagaaaatttttgcaaccaggaatg | |||
Mapping_target | Y37A1A | ||||
Type_of_mutation | Substitution | T | A | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
RFLP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004602 | From_analysis | Million_mutation_project_reanalysis | ||
Analysis | SNP_Wicks | ||||
Million_mutation_project_reanalysis | |||||
Status | Live | ||||
Affects | Gene | WBGene00012536 | |||
Transcript | Y37A1A.3.1 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | Y37A1A.3.1:c.1317-23A>T | ||||
Intron_number | 7/9 | ||||
Reference | WBPaper00004703 | ||||
Remark | Predicted SNP: Psnp=0.9427 VarS=AT | ||||
Enzymes. SNP detectable only by sequencing. | |||||
[20040130 db] this Locus was previously named snp_Y37A1.3 | |||||
[20040130 db] this Allele was previously named snp_Y37A1.3 | |||||
[20090224 db] this Variation was previously named snp_Y37A1[3] | |||||
[20090224 db] original Wicks name : Y37A1A:3401..4306@758 Psnp=0.9427 VarS=AT | |||||
[20090224 db] original Wicks id : yy44b08.s1@85,a,59 | |||||
[20090224 db] Snip-SNP | |||||
Method | SNP_Wicks |