WormBase Tree Display for Variation: WBVar00246914

WBVar00246914 Evidence: Paper_evidence: WBPaper00004703
  Name: Public_name: WBVar00246914
    Other_name: snp_Y36E3A[4]
      T26H5.8.2:c.677-48_677-47insGCAACGTAG
      T26H5.8.1:c.677-48_677-47insGCAACGTAG
    HGVSg: CHROMOSOME_V:g.15428005_15428006insCTACGTTGC
  Sequence_details: SMap: S_parent: Sequence: Y36E3A
    Flanking_sequences: gggcaaatactcttttactacctca tcttttactacgttgctcttttact
    Mapping_target: Y36E3A
    Type_of_mutation: Insertion: CTACGTTGC
    SeqStatus: Sequenced
  Variation_type: SNP
    Predicted_SNP
    RFLP
    Natural_variant
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00004602 From_analysis: SNP_Wicks
    Analysis: SNP_Wicks
    Status: Live
  Affects: Gene: WBGene00012070
    Transcript: T26H5.8.2 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: T26H5.8.2:c.677-48_677-47insGCAACGTAG
        Intron_number: 8/13
      T26H5.8.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: T26H5.8.1:c.677-48_677-47insGCAACGTAG
        Intron_number: 7/12
  Reference: WBPaper00004703
  Remark: Predicted SNP: Psnp=0.9221 VarI9=CTACGTTGC
    Enzymes. SNP detectable only by sequencing.
    [20040130 db] this Locus was previously named snp_Y36E3.4
    [20040130 db] this Allele was previously named snp_Y36E3.4
    [20090224 db] this Variation was previously named snp_Y36E3[4]
    [20090224 db] original Wicks name : Y36E3A:4562..5498@213 Psnp=0.9221 VarI9=CTACGTTGC
    [20090224 db] original Wicks id : eam48f07.s1@146,c,59
    [20090224 db] Snip-SNP
  Method: SNP_Wicks