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WormBase Tree Display for Variation: WBVar00246871

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Name Class

WBVar00246871EvidencePaper_evidenceWBPaper00004703
NamePublic_nameWBVar00246871
Other_namesnp_Y25C1A[8]
Y25C1A.5.1:c.1530-69A>T
HGVSgCHROMOSOME_II:g.3083760A>T
Sequence_detailsSMapS_parentSequenceY25C1A
Flanking_sequencesaaataaattgattttttttatttggaaaacccgcaaaaaattgaaaaatt
Mapping_targetY25C1A
Type_of_mutationSubstitutionAT
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00004602From_analysisSNP_Wicks
AnalysisSNP_Wicks
StatusLive
AffectsGeneWBGene00021292
TranscriptY25C1A.5.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY25C1A.5.1:c.1530-69A>T
Intron_number5/8
ReferenceWBPaper00004703
RemarkPredicted SNP: Psnp=0.7349 VarS=AT
Enzymes. SNP detectable only by sequencing.
[20040130 db] this Locus was previously named snp_Y25C1.8
[20040130 db] this Allele was previously named snp_Y25C1.8
[20090224 db] this Variation was previously named snp_Y25C1[8]
[20090224 db] original Wicks name : Y25C1A:25498..26066@112 Psnp=0.7349 VarS=AT
[20090224 db] original Wicks id : vl24e05.s1@325,t,33
MethodSNP_Wicks