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WormBase Tree Display for Variation: WBVar00246866

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Name Class

WBVar00246866NamePublic_nameWBVar00246866
Other_namesnp_Y25C1A[3]
cewivar00182564
Sequence_detailsSMapS_parentSequenceY25C1A
Flanking_sequencesccgtttttagcgcgttctcgcgagctccttccagtcgactgtcccctcca
Mapping_targetY25C1A
Type_of_mutationSubstitutionAT
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
RFLP
Natural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00004602From_analysisSNP_Wicks
WGS_De_Bono
Million_mutation_project_reanalysis
WBStrain00023191From_analysisMillion_mutation_project_reanalysis
WBStrain00024204From_analysisMillion_mutation_project_reanalysis
LaboratoryAX
AnalysisSNP_Wicks
WGS_De_Bono
Million_mutation_project_reanalysis
HistoryAcquires_mergeWBVar01366121
StatusLive
ReferenceWBPaper00004703
WBPaper00037807
RemarkPredicted SNP: Psnp=0.8901 VarS=AT
Enzymes. Bristol-specific: [BscAI,BscUI,BseGI,BsmNI,BspST5I,BstF5I,BstPZ418I,CjeP338II,FokI,HinGUII,Hpy178VI,HpyF67III,HpyF6I,PhaI,SfaNI,StsI]. CB4856-specific [none].
[20040130 db] this Locus was previously named snp_Y25C1.3
[20040130 db] this Allele was previously named snp_Y25C1.3
[20090224 db] this Variation was previously named snp_Y25C1[3]
[20090224 db] original Wicks name : Y25C1A:2422..3371@507 Psnp=0.8901 VarS=AT
[20090224 db] original Wicks id : eam52e10.s1@432,t,29 eam52f10.s1@436,t,20
[20090224 db] Snip-SNP
MethodSNP_Wicks