WormBase Tree Display for Variation: WBVar00246802

WBVar00246802 Evidence: Paper_evidence: WBPaper00004703
  Name: Public_name: WBVar00246802
    Other_name: snp_Y17G7B[10]
      Y17G7B.6c.1:c.81-2290dup
      Y17G7B.6b.1:c.291-2290dup
      Y17G7B.6a.1:c.492-2290dup
    HGVSg: CHROMOSOME_II:g.12019787dup
  Sequence_details: SMap: S_parent: Sequence: Y17G7B
    Flanking_sequences: atgtttgaaaataaaaataaaaaaa tttaataaaaaaattaatttcccat
    Mapping_target: Y17G7B
    Type_of_mutation: Insertion: A
    SeqStatus: Sequenced
  Variation_type: SNP
    Predicted_SNP
    Natural_variant
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00004602 From_analysis: SNP_Wicks
    Analysis: SNP_Wicks
    Status: Live
  Affects: Gene: WBGene00012461
    Transcript: Y17G7B.6c.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: Y17G7B.6c.1:c.81-2290dup
        Intron_number: 2/7
      Y17G7B.6a.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: Y17G7B.6a.1:c.492-2290dup
        Intron_number: 6/11
      Y17G7B.6b.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: Y17G7B.6b.1:c.291-2290dup
        Intron_number: 4/9
  Reference: WBPaper00004703
  Remark: Predicted SNP: Psnp=0.9221 VarI1=A
    Enzymes. SNP detectable only by sequencing.
    [20040130 db] this Locus was previously named snp_Y17G7B.10
    [20040130 db] this Allele was previously named snp_Y17G7B.10
    [20090224 db] original Wicks name : Y17G7B:50579..51507@417 Psnp=0.9221 VarI1=A
    [20090224 db] original Wicks id : eam36d11.s1@466,a,59
  Method: SNP_Wicks