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WormBase Tree Display for Variation: WBVar00246744

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Name Class

WBVar00246744EvidencePaper_evidenceWBPaper00004703
NamePublic_nameWBVar00246744
Other_namesnp_Y6B3B[6]
Y6B3B.5a.1:c.*26del
Y6B3B.5a.2:c.*26del
HGVSgCHROMOSOME_I:g.13751310del
Sequence_detailsSMapS_parentSequenceY6B3B
Flanking_sequencestaaaatggtaaaatgcaaaaaaaaataggaaaaaaactaaaaaattaaaa
Mapping_targetY6B3B
Type_of_mutationDeletionA
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00004602From_analysisSNP_Wicks
AnalysisSNP_Wicks
StatusLive
AffectsGeneWBGene00012390
TranscriptY6B3B.5a.1VEP_consequence3_prime_UTR_variant
VEP_impactMODIFIER
HGVScY6B3B.5a.1:c.*26del
cDNA_position1134
Exon_number11/11
Y6B3B.5a.2VEP_consequence3_prime_UTR_variant
VEP_impactMODIFIER
HGVScY6B3B.5a.2:c.*26del
cDNA_position1092
Exon_number11/11
ReferenceWBPaper00004703
RemarkPredicted SNP: Psnp=0.8888 VarD1=A
Enzymes. SNP detectable only by sequencing.
[20040130 db] this Locus was previously named snp_Y6B3B.6
[20040130 db] this Allele was previously named snp_Y6B3B.6
[20090224 db] original Wicks name : Y6B3B:50799..51798@231 Psnp=0.8888 VarD1=A
[20090224 db] original Wicks id : yy45e10.s1@188,-,59 eam51f01.s1@84,-,62
MethodSNP_Wicks