WormBase Tree Display for Variation: WBVar00246594

WBVar00246594 Name: Public_name: WBVar00246594
    Other_name: snp_W03C9[1]
      cewivar00186369
      W03C9.4b.1:c.-33-442G>A
    HGVSg: CHROMOSOME_II:g.11933699C>T
  Sequence_details: SMap: S_parent: Sequence: W03C9
    Flanking_sequences: gaggaacaacatactgcacctgccc gaagtacggcggtgaaacttggaaa
    Mapping_target: W03C9
    Type_of_mutation: Substitution: C T
    SeqStatus: Sequenced
  Variation_type: SNP
    Predicted_SNP
    RFLP
    Natural_variant
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00004602 From_analysis: SNP_Wicks
          WGS_De_Bono
          Million_mutation_project_reanalysis
    Laboratory: AX
    Analysis: SNP_Wicks
      WGS_De_Bono
      Million_mutation_project_reanalysis
    History: Acquires_merge: WBVar01377454
    Status: Live
  Affects: Gene: WBGene00003015
    Transcript: W03C9.4b.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: W03C9.4b.1:c.-33-442G>A
        Intron_number: 1/12
  Reference: WBPaper00004703
    WBPaper00037807
  Remark: Predicted SNP: Psnp=0.9427 VarS=CT
    Enzymes. Bristol-specific: [Bsc107I,Bsc4I,Bse23I,BseLI,BsiYI,BslI,BsmYI]. CB4856-specific [none].
    [20040130 db] this Locus was previously named snp_W03C9.1
    [20040130 db] this Allele was previously named snp_W03C9.1
    [20090224 db] original Wicks name : W03C9:732..1313@180 Psnp=0.9427 VarS=CT
    [20090224 db] original Wicks id : hm42d02.s1@126,t,59
    [20090224 db] Snip-SNP
  Method: SNP_Wicks