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WormBase Tree Display for Variation: WBVar00246586

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Name Class

WBVar00246586EvidencePaper_evidenceWBPaper00004703
NamePublic_nameWBVar00246586
Other_namesnp_W02G9[5]
W02G9.2b.1:c.61-320C>A
W02G9.2a.1:c.-51-320C>A
W02G9.2a.3:c.-51-320C>A
HGVSgCHROMOSOME_V:g.2682906C>A
Sequence_detailsSMapS_parentSequenceW02G9
Flanking_sequencesttcagaaaaaaaaacataacgaagcctaactggactttatcctctgattt
Mapping_targetW02G9
Type_of_mutationSubstitutionCA
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
RFLP
Natural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00004602From_analysisSNP_Wicks
AnalysisSNP_Wicks
StatusLive
AffectsGeneWBGene00020952
TranscriptW02G9.2a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScW02G9.2a.1:c.-51-320C>A
Intron_number1/8
W02G9.2a.3VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScW02G9.2a.3:c.-51-320C>A
Intron_number1/8
W02G9.2b.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScW02G9.2b.1:c.61-320C>A
Intron_number1/6
ReferenceWBPaper00004703
RemarkPredicted SNP: Psnp=0.9328 VarS=AC
Enzymes. Bristol-specific: [CviJI,CviKI,CviLI,CviMI,CviNI,CviOI,CviTI]. CB4856-specific [none].
[20040130 db] this Locus was previously named snp_W02G9.5
[20040130 db] this Allele was previously named snp_W02G9.5
[20090224 db] original Wicks name : W02G9:29179..30140@543 Psnp=0.9328 VarS=AC
[20090224 db] original Wicks id : eam66a12.s1@351,a,47
[20090224 db] Snip-SNP
MethodSNP_Wicks