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WormBase Tree Display for Variation: WBVar00246584

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Name Class

WBVar00246584EvidencePaper_evidenceWBPaper00004703
NamePublic_nameWBVar00246584
Other_namesnp_W02G9[3]
W02G9.2a.1:c.-51-328_-51-322del
W02G9.2b.1:c.61-328_61-322del
W02G9.2a.3:c.-51-328_-51-322del
HGVSgCHROMOSOME_V:g.2682898_2682904del
Sequence_detailsSMapS_parentSequenceW02G9
Flanking_sequencestatttttcttcagaaaaaaaaacatccctaactggactttatcctctgat
Mapping_targetW02G9
Type_of_mutationDeletionAACGAAG
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
RFLP
Natural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00004602From_analysisSNP_Wicks
AnalysisSNP_Wicks
StatusLive
AffectsGeneWBGene00020952
TranscriptW02G9.2a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScW02G9.2a.1:c.-51-328_-51-322del
Intron_number1/8
W02G9.2a.3VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScW02G9.2a.3:c.-51-328_-51-322del
Intron_number1/8
W02G9.2b.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScW02G9.2b.1:c.61-328_61-322del
Intron_number1/6
ReferenceWBPaper00004703
RemarkPredicted SNP: Psnp=0.9091 VarD7=AACGAAG
Enzymes. Bristol-specific: [CviJI,CviKI,CviLI,CviMI,CviNI,CviOI,CviTI]. CB4856-specific [none].
[20040130 db] this Locus was previously named snp_W02G9.3
[20040130 db] this Allele was previously named snp_W02G9.3
[20090224 db] original Wicks name : W02G9:29179..30140@541 Psnp=0.9091 VarD7=AACGAAG
[20090224 db] original Wicks id : eam66a12.s1@352,-,47
[20090224 db] Snip-SNP
MethodSNP_Wicks