WormBase Tree Display for Variation: WBVar00246378
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WBVar00246378 | Evidence | Paper_evidence | WBPaper00004703 | ||
---|---|---|---|---|---|
Name | Public_name | WBVar00246378 | |||
Other_name | snp_T23E7[1] | ||||
T23E7.4b.2:c.98+310A>G | |||||
T23E7.4a.1:c.98+310A>G | |||||
T23E7.4b.1:c.98+310A>G | |||||
HGVSg | CHROMOSOME_X:g.17662870A>G | ||||
Sequence_details | SMap | S_parent | Sequence | T23E7 | |
Flanking_sequences | tactctggttggagtgagtgtttca | ggggtaatacttgtttttggtacag | |||
Mapping_target | T23E7 | ||||
Type_of_mutation | Substitution | A | G | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004602 | From_analysis | SNP_Wicks | ||
Analysis | SNP_Wicks | ||||
Status | Live | ||||
Affects | Gene | WBGene00003744 | |||
Transcript | T23E7.4b.2 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | T23E7.4b.2:c.98+310A>G | ||||
Intron_number | 2/4 | ||||
T23E7.4b.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | T23E7.4b.1:c.98+310A>G | ||||
Intron_number | 2/5 | ||||
T23E7.4a.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | T23E7.4a.1:c.98+310A>G | ||||
Intron_number | 2/4 | ||||
Reference | WBPaper00004703 | ||||
Remark | Predicted SNP: Psnp=0.9301 VarS=AG | ||||
Enzymes. SNP detectable only by sequencing. | |||||
[20040130 db] this Locus was previously named snp_T23E7.1 | |||||
[20040130 db] this Allele was previously named snp_T23E7.1 | |||||
[20090224 db] original Wicks name : T23E7:17390..18346@858 Psnp=0.9301 VarS=AG | |||||
[20090224 db] original Wicks id : eam66b11.s1@31,g,46 | |||||
Method | SNP_Wicks |