WormBase Tree Display for Variation: WBVar00246358

WBVar00246358 Name: Public_name: WBVar00246358
    Other_name: snp_T22F3[4]
      haw164110
      cewivar00229261
      CE47089:p.Ile175=
      T22F3.10.1:c.525T>A
    HGVSg: CHROMOSOME_V:g.3609495A>T
  Sequence_details: SMap: S_parent: Sequence: T22F3
    Flanking_sequences: atttccaacccaatgagctctcaca ataagcccggtcaacgagttggtgg
    Mapping_target: T22F3
    Type_of_mutation: Substitution: A T
    SeqStatus: Sequenced
  Variation_type: SNP
    Predicted_SNP
    Natural_variant
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00004602 From_analysis: SNP_Wicks
          WGS_Yanai
          Million_mutation_project_reanalysis
    Person: WBPerson4037
    Analysis: SNP_Wicks
      WGS_Yanai
      Million_mutation_project_reanalysis
    History: Acquires_merge: WBVar00583975
    Status: Live
  Affects: Gene: WBGene00020699
    Transcript: T22F3.10.1 VEP_consequence: synonymous_variant
        VEP_impact: LOW
        HGVSc: T22F3.10.1:c.525T>A
        HGVSp: CE47089:p.Ile175=
        cDNA_position: 1604
        CDS_position: 525
        Protein_position: 175
        Exon_number: 6/12
        Codon_change: atT/atA
        Amino_acid_change: I
  Reference: WBPaper00038208
    WBPaper00004703
  Remark: Predicted SNP: Psnp=0.8806 VarS=AT
    Enzymes. SNP detectable only by sequencing.
    [20040130 db] this Locus was previously named snp_T22F3.4
    [20040130 db] this Allele was previously named snp_T22F3.4
    [20090224 db] original Wicks name : T22F3:30117..31125@250 Psnp=0.8806 VarS=AT
    [20090224 db] original Wicks id : aab86e08.s1@189,t,39
  Method: SNP_Wicks