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WormBase Tree Display for Variation: WBVar00246292

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Name Class

WBVar00246292NamePublic_nameWBVar00246292
Other_namesnp_T19C9[2]
haw175219
cewivar00255741
T19C9.1.1:c.633+49A>G
HGVSgCHROMOSOME_V:g.17218715A>G
Sequence_detailsSMapS_parentSequenceT19C9
Flanking_sequencesaaaaaccgctgtgaccaggatttgggagattttcaatgtaattgggcttt
Mapping_targetT19C9
Type_of_mutationSubstitutionAG
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
Strain (15)
LaboratoryAX
PersonWBPerson4037
AnalysisSNP_Wicks
WGS_De_Bono
WGS_Yanai
Million_mutation_project_reanalysis
HistoryAcquires_mergeWBVar01276454
WBVar00595084
StatusLive
AffectsGeneWBGene00011840
TranscriptT19C9.1.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScT19C9.1.1:c.633+49A>G
Intron_number2/2
ReferenceWBPaper00038208
WBPaper00004703
WBPaper00037807
RemarkPredicted SNP: Psnp=0.5508 VarS=AG
Enzymes. SNP detectable only by sequencing.
[20040130 db] this Locus was previously named snp_T19C9.2
[20040130 db] this Allele was previously named snp_T19C9.2
[20090224 db] original Wicks name : T19C9:1505..2481@757 Psnp=0.5508 VarS=AG
[20090224 db] original Wicks id : eam47e01.s1@682,g,29
MethodSNP_Wicks