WormBase Tree Display for Variation: WBVar00246292
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WBVar00246292 | Name | Public_name | WBVar00246292 | ||
---|---|---|---|---|---|
Other_name | snp_T19C9[2] | ||||
haw175219 | |||||
cewivar00255741 | |||||
T19C9.1.1:c.633+49A>G | |||||
HGVSg | CHROMOSOME_V:g.17218715A>G | ||||
Sequence_details | SMap | S_parent | Sequence | T19C9 | |
Flanking_sequences | aaaaaccgctgtgaccaggatttgg | gagattttcaatgtaattgggcttt | |||
Mapping_target | T19C9 | ||||
Type_of_mutation | Substitution | A | G | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain (15) | |||||
Laboratory | AX | ||||
Person | WBPerson4037 | ||||
Analysis | SNP_Wicks | ||||
WGS_De_Bono | |||||
WGS_Yanai | |||||
Million_mutation_project_reanalysis | |||||
History | Acquires_merge | WBVar01276454 | |||
WBVar00595084 | |||||
Status | Live | ||||
Affects | Gene | WBGene00011840 | |||
Transcript | T19C9.1.1 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | T19C9.1.1:c.633+49A>G | ||||
Intron_number | 2/2 | ||||
Reference | WBPaper00038208 | ||||
WBPaper00004703 | |||||
WBPaper00037807 | |||||
Remark | Predicted SNP: Psnp=0.5508 VarS=AG | ||||
Enzymes. SNP detectable only by sequencing. | |||||
[20040130 db] this Locus was previously named snp_T19C9.2 | |||||
[20040130 db] this Allele was previously named snp_T19C9.2 | |||||
[20090224 db] original Wicks name : T19C9:1505..2481@757 Psnp=0.5508 VarS=AG | |||||
[20090224 db] original Wicks id : eam47e01.s1@682,g,29 | |||||
Method | SNP_Wicks |