WormBase Tree Display for Variation: WBVar00246262

WBVar00246262 Evidence: Paper_evidence: WBPaper00004703
  Name: Public_name: WBVar00246262
    Other_name: snp_T15B7[2]
      cewivar00699923
      T15B7.2.1:c.50+5del
    HGVSg: CHROMOSOME_V:g.6839350del
  Sequence_details: SMap: S_parent: Sequence: T15B7
    Flanking_sequences: caacgtgttacaaattttagggtac tttttttttctgaaagaagttcact
    Mapping_target: T15B7
    Type_of_mutation: Deletion: G
    SeqStatus: Sequenced
  Variation_type: SNP
    Predicted_SNP
    RFLP
    Natural_variant
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00004602 From_analysis: Million_mutation_project_reanalysis
    Analysis: SNP_Wicks
      Million_mutation_project_reanalysis
    Status: Live
  Affects: Gene: WBGene00020517
    Transcript: T15B7.2.1 VEP_consequence: splice_region_variant,intron_variant
        VEP_impact: LOW
        HGVSc: T15B7.2.1:c.50+5del
        Intron_number: 2/6
  Reference: WBPaper00004703
  Remark: Predicted SNP: Psnp=0.8227 VarD1=G
    Enzymes. Bristol-specific: [HpyCH4IV,HpyF13III,HpyF35II,HpyF74II,MaeII,TaiI,TatI,TscI,Tsp49I,TspIDSI,TspWAM8AI,TtmI]. CB4856-specific [none].
    [20040130 db] this Locus was previously named snp_T15B7.2
    [20040130 db] this Allele was previously named snp_T15B7.2
    [20090224 db] original Wicks name : T15B7:28145..28996@588 Psnp=0.8227 VarD1=G
    [20090224 db] original Wicks id : yx25f01.s1@525,-,38
    [20090224 db] Snip-SNP
  Method: SNP_Wicks