WormBase Tree Display for Variation: WBVar00246194

WBVar00246194 Name: Public_name: WBVar00246194
    Other_name: snp_T10B5[1]
      haw161664
      cewivar00222997
      T10B5.10b.1:c.286-591A>G
      T10B5.10a.1:c.322-591A>G
    HGVSg: CHROMOSOME_V:g.1854151T>C
  Sequence_details: SMap: S_parent: Sequence: T10B5
    Flanking_sequences: tgtcgacttattattgggttactgtagggt actgtagatttttaaaatatactcagtggt
    Mapping_target: T10B5
    Type_of_mutation: Substitution: T C
    SeqStatus: Sequenced
  Variation_type: SNP
    Predicted_SNP
    RFLP
    Natural_variant
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00004602 From_analysis: SNP_Wicks
          WGS_Yanai
          Million_mutation_project_reanalysis
    Person: WBPerson4037
    Analysis: SNP_Wicks
      WGS_Yanai
      Million_mutation_project_reanalysis
    History: Acquires_merge: WBVar00581529
    Status: Live
  Affects: Gene: WBGene00020396
    Transcript: T10B5.10b.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: T10B5.10b.1:c.286-591A>G
        Intron_number: 3/6
      T10B5.10a.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: T10B5.10a.1:c.322-591A>G
        Intron_number: 4/8
  Reference: WBPaper00038208
    WBPaper00004703
  Remark: Predicted SNP: Psnp=0.9427 VarS=CT
    Enzymes. Bristol-specific: [Hpy51I,Hpy8II,Hpy99II,HpyF13I,HpyF1I,HpyF25II,HpyF31II,HpyF34II,HpyF35IV,HpyF36I,HpyF40III,HpyF48I,HpyF49II,HpyF4I,HpyF51I,HpyF62III,HpyF6II,HpyF9I,NmuCI,Tsp45I]. CB4856-specific [none].
    [20040130 db] this Locus was previously named snp_T10B5.1
    [20040130 db] this Allele was previously named snp_T10B5.1
    [20090224 db] original Wicks name : T10B5:19432..20226@243 Psnp=0.9427 VarS=CT
    [20090224 db] original Wicks id : vr80f07.s1@180,c,59
    [20090224 db] Snip-SNP
  Method: SNP_Wicks