WormBase Tree Display for Variation: WBVar00246191

WBVar00246191 Evidence: Paper_evidence: WBPaper00004703
  Name: Public_name: WBVar00246191
    Other_name: snp_T09F5[1]
      cewivar00245025
      K08F9.4.1:c.1482T>A
      CE11948:p.Pro494=
    HGVSg: CHROMOSOME_V:g.15146240T>A
  Sequence_details: SMap: S_parent: Sequence: T09F5
    Flanking_sequences: acgagaccagcacgtcacaaatccc cagacggagaaaaatccaatagagc
    Mapping_target: T09F5
    Type_of_mutation: Substitution: T A
    SeqStatus: Sequenced
  Variation_type: SNP
    Predicted_SNP
    RFLP
    Natural_variant
  Origin: Species: Caenorhabditis elegans
    Strain (11)
    Analysis: SNP_Wicks
      Million_mutation_project_reanalysis
    Status: Live
  Affects: Gene: WBGene00010687
    Transcript: K08F9.4.1 VEP_consequence: synonymous_variant
        VEP_impact: LOW
        HGVSc: K08F9.4.1:c.1482T>A
        HGVSp: CE11948:p.Pro494=
        cDNA_position: 1584
        CDS_position: 1482
        Protein_position: 494
        Exon_number: 8/9
        Codon_change: ccT/ccA
        Amino_acid_change: P
  Reference: WBPaper00004703
  Remark: Predicted SNP: Psnp=0.8657 VarS=AT
    Enzymes. Bristol-specific: [BscPI,BseMII,Bst295I,BstDEI,BstJZ301I,DdeI,Hpy166I,Hpy166III,Hpy188I,HpyCH4II,HpyF11I,HpyF11II,HpyF12II,HpyF13II,HpyF15II,HpyF17I,HpyF19I,HpyF19II,HpyF21I,HpyF22II,HpyF24II,HpyF25I,HpyF27I,HpyF27II,HpyF28I,HpyF30II,HpyF32I,HpyF33I,HpyF34I,HpyF37I,HpyF3I,HpyF41II,HpyF42III,HpyF46IV,HpyF4II,HpyF50II,HpyF59I,HpyF5I,HpyF60II,HpyF61I,HpyF64III,HpyF64V,HpyF66II,HpyF67I,HpyF68II,HpyF6III,HpyF70I,HpyF72II,HpyF7I,HpyF9II,HpyHPK5I,MnlI]. CB4856-specific [none].
    [20040130 db] this Locus was previously named snp_T09F5.1
    [20040130 db] this Allele was previously named snp_T09F5.1
    [20090224 db] original Wicks name : T09F5:86..1018@368 Psnp=0.8657 VarS=AT
    [20090224 db] original Wicks id : eam36g03.s1@522,a,38
    [20090224 db] Snip-SNP
  Method: SNP_Wicks