WormBase Tree Display for Variation: WBVar00246187
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WBVar00246187 | Name | Public_name | WBVar00246187 | ||
---|---|---|---|---|---|
Other_name | snp_T09E11[7] | ||||
haw120871 | |||||
cewivar00172464 | |||||
T09E11.7.1:c.609T>C | |||||
CE13509:p.Phe203= | |||||
HGVSg | CHROMOSOME_I:g.12354207T>C | ||||
Sequence_details | SMap | S_parent | Sequence | T09E11 | |
Flanking_sequences | ttgtgtctcctccagatgtttcattcaacagtgtgtttgcaagaagttggcagtt | ttaatcggcatggtagttcacctga | |||
Mapping_target | T09E11 | ||||
Type_of_mutation | Substitution | T | C | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain (21) | |||||
Laboratory | AX | ||||
Person | WBPerson4037 | ||||
Analysis | SNP_Wicks | ||||
WGS_De_Bono | |||||
WGS_Yanai | |||||
Million_mutation_project_reanalysis | |||||
History | Acquires_merge | WBVar01287312 | |||
WBVar01426125 | |||||
WBVar00540736 | |||||
WBVar01351804 | |||||
Status | Live | ||||
Affects | Gene | WBGene00011656 | |||
Transcript | T09E11.7.1 | VEP_consequence | synonymous_variant | ||
VEP_impact | LOW | ||||
HGVSc | T09E11.7.1:c.609T>C | ||||
HGVSp | CE13509:p.Phe203= | ||||
cDNA_position | 609 | ||||
CDS_position | 609 | ||||
Protein_position | 203 | ||||
Exon_number | 3/10 | ||||
Codon_change | ttT/ttC | ||||
Amino_acid_change | F | ||||
Reference | WBPaper00038208 | ||||
WBPaper00004703 | |||||
WBPaper00037807 | |||||
Remark | Predicted SNP: Psnp=0.9427 VarS=CT | ||||
Enzymes. SNP detectable only by sequencing. | |||||
[20040130 db] this Locus was previously named snp_T09E11.7 | |||||
[20040130 db] this Allele was previously named snp_T09E11.7 | |||||
[20090224 db] original Wicks name : T09E11:15677..16673@808 Psnp=0.9427 VarS=CT | |||||
[20090224 db] original Wicks id : eam43c08.s1@119,c,59 | |||||
Method | SNP_Wicks |