WormBase Tree Display for Variation: WBVar00246082
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WBVar00246082 | Evidence | Paper_evidence | WBPaper00004703 | ||
---|---|---|---|---|---|
Name | Public_name | WBVar00246082 | |||
Other_name | snp_T05B4[1] | ||||
cewivar00231674 | |||||
T05B4.7.1:c.690+8T>G | |||||
HGVSg | CHROMOSOME_V:g.4111874A>C | ||||
Sequence_details | SMap | S_parent | Sequence | T05B4 | |
Flanking_sequences | gatggcacagtataagttagtaaaa | acctcacatgtgaaacaatcgctgc | |||
Mapping_target | T05B4 | ||||
Type_of_mutation | Substitution | A | C | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004602 | From_analysis | Million_mutation_project_reanalysis | ||
Analysis | SNP_Wicks | ||||
Million_mutation_project_reanalysis | |||||
Status | Live | ||||
Affects | Gene | WBGene00005881 | |||
Transcript | T05B4.7.1 | VEP_consequence | splice_region_variant,intron_variant | ||
VEP_impact | LOW | ||||
HGVSc | T05B4.7.1:c.690+8T>G | ||||
Intron_number | 2/4 | ||||
Reference | WBPaper00004703 | ||||
Remark | Predicted SNP: Psnp=0.8002 VarS=AC | ||||
Enzymes. SNP detectable only by sequencing. | |||||
[20040130 db] this Locus was previously named snp_T05B4.1 | |||||
[20040130 db] this Allele was previously named snp_T05B4.1 | |||||
[20090224 db] original Wicks name : T05B4:5678..6807@492 Psnp=0.8002 VarS=AC | |||||
[20090224 db] original Wicks id : yw18h05.s1@579,c,35 | |||||
Method | SNP_Wicks |