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WormBase Tree Display for Variation: WBVar00245674

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Name Class

WBVar00245674NamePublic_nameWBVar00245674
Other_namesnp_M01D7[2]
haw114266
cewivar00070039
Y71G12A.3a.1:c.-115G>A
HGVSgCHROMOSOME_I:g.1874062G>A
Sequence_detailsSMapS_parentSequenceY71G12A
Flanking_sequencescctctccgtctgcctgcctgtgtgttgtgtgtgtgtgcgtcctcctgaaa
Mapping_targetY71G12A
Type_of_mutationSubstitutionGA
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
Strain (27)
LaboratoryAX
PersonWBPerson4037
AnalysisSNP_Wicks
WGS_De_Bono
WGS_Yanai
Million_mutation_project_reanalysis
HistoryAcquires_mergeWBVar01320261
WBVar00534131
WBVar01278476
StatusLive
AffectsGeneWBGene00022139
TranscriptY71G12A.3a.1VEP_consequence5_prime_UTR_variant
VEP_impactMODIFIER
HGVScY71G12A.3a.1:c.-115G>A
cDNA_position55
Exon_number1/8
ReferenceWBPaper00038208
WBPaper00004703
WBPaper00037807
RemarkPredicted SNP: Psnp=0.9328 VarS=AG
Enzymes. SNP detectable only by sequencing.
[20040130 db] this Locus was previously named snp_M01D7.2
[20040130 db] this Allele was previously named snp_M01D7.2
[20090224 db] original Wicks name : M01D7:37766..38704@413 Psnp=0.9328 VarS=AG
[20090224 db] original Wicks id : yy46g08.s1@360,a,47
MethodSNP_Wicks