WormBase Tree Display for Variation: WBVar00245674
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WBVar00245674 | Name | Public_name | WBVar00245674 | ||
---|---|---|---|---|---|
Other_name | snp_M01D7[2] | ||||
haw114266 | |||||
cewivar00070039 | |||||
Y71G12A.3a.1:c.-115G>A | |||||
HGVSg | CHROMOSOME_I:g.1874062G>A | ||||
Sequence_details | SMap | S_parent | Sequence | Y71G12A | |
Flanking_sequences | cctctccgtctgcctgcctgtgtgt | tgtgtgtgtgtgcgtcctcctgaaa | |||
Mapping_target | Y71G12A | ||||
Type_of_mutation | Substitution | G | A | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain (27) | |||||
Laboratory | AX | ||||
Person | WBPerson4037 | ||||
Analysis | SNP_Wicks | ||||
WGS_De_Bono | |||||
WGS_Yanai | |||||
Million_mutation_project_reanalysis | |||||
History | Acquires_merge | WBVar01320261 | |||
WBVar00534131 | |||||
WBVar01278476 | |||||
Status | Live | ||||
Affects | Gene | WBGene00022139 | |||
Transcript | Y71G12A.3a.1 | VEP_consequence | 5_prime_UTR_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | Y71G12A.3a.1:c.-115G>A | ||||
cDNA_position | 55 | ||||
Exon_number | 1/8 | ||||
Reference | WBPaper00038208 | ||||
WBPaper00004703 | |||||
WBPaper00037807 | |||||
Remark | Predicted SNP: Psnp=0.9328 VarS=AG | ||||
Enzymes. SNP detectable only by sequencing. | |||||
[20040130 db] this Locus was previously named snp_M01D7.2 | |||||
[20040130 db] this Allele was previously named snp_M01D7.2 | |||||
[20090224 db] original Wicks name : M01D7:37766..38704@413 Psnp=0.9328 VarS=AG | |||||
[20090224 db] original Wicks id : yy46g08.s1@360,a,47 | |||||
Method | SNP_Wicks |