WormBase Tree Display for Variation: WBVar00245650
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| WBVar00245650 | Evidence | Paper_evidence | WBPaper00004703 | ||
|---|---|---|---|---|---|
| Name | Public_name | WBVar00245650 | |||
| Other_name | snp_K12B6[2] | ||||
| cewivar00338860 | |||||
| Sequence_details | SMap | S_parent | Sequence | K12B6 | |
| Flanking_sequences | gggtatcaccacgaagggtctcacc | cgatgggtctcaccacgatgggtct | |||
| Mapping_target | K12B6 | ||||
| Type_of_mutation | Substitution | G | A | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| RFLP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain | WBStrain00004602 | From_analysis | SNP_Wicks | ||
| WBStrain00006629 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00022850 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00027648 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00027660 | From_analysis | Million_mutation_project_reanalysis | |||
| Analysis | SNP_Wicks | ||||
| Million_mutation_project_reanalysis | |||||
| Status | Live | ||||
| Reference | WBPaper00004703 | ||||
| Remark | Predicted SNP: Psnp=0.9430 VarS=AG | ||||
| Enzymes. Bristol-specific: [AccII,AciI,Bce31293I,BceBI,BceRI,BepI,Bpu95I,Bsh1236I,Bsp123I,Bsp50I,Bsp70I,BspJ76I,BstFNI,BstUI,Bsu1192II,Bsu1193I,Bsu1532I,Bsu6633I,BsuEII,BtkI,Cpa1150I,CpaAI,Csp68KVI,CspKVI,FauBII,FspMI,Hin1056I,HpyF14I,HpyF15I,HpyF26I,HpyF52II,HpyF64IV,MvaAI,MvnI,PflAI,SceAI,SelI,ThaI,TmaI,Uba1321I,Uba1404I,Uba1405I,Uba1446I]. CB4856-specific [none]. | |||||
| [20040130 db] this Locus was previously named snp_K12B6.2 | |||||
| [20040130 db] this Allele was previously named snp_K12B6.2 | |||||
| [20090224 db] original Wicks name : K12B6:22212..23179@177 Psnp=0.9430 VarS=AG | |||||
| [20090224 db] original Wicks id : eam63c09.s1@105,a,62 | |||||
| [20090224 db] Snip-SNP | |||||
| Method | SNP_Wicks |
