WormBase Tree Display for Variation: WBVar00245604

WBVar00245604 Evidence: Paper_evidence: WBPaper00004703
  Name: Public_name: WBVar00245604
    Other_name: snp_K10E9[2]
      Y48G1BL.2b.1:c.1450+232dup
      Y48G1BL.2a.1:c.3481+232dup
    HGVSg: CHROMOSOME_I:g.196565dup
  Sequence_details: SMap: S_parent: Sequence: K10E9
    Flanking_sequences: ttgtttcagatttattctggttttt attgaattttcagattttttcttca
    Mapping_target: K10E9
    Type_of_mutation: Insertion: T
    SeqStatus: Sequenced
  Variation_type: SNP
    Predicted_SNP
    Natural_variant
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00004602 From_analysis: SNP_Wicks
    Analysis: SNP_Wicks
    Status: Live
  Affects: Gene: WBGene00000227
    Transcript: Y48G1BL.2b.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: Y48G1BL.2b.1:c.1450+232dup
        Intron_number: 6/18
      Y48G1BL.2a.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: Y48G1BL.2a.1:c.3481+232dup
        Intron_number: 16/29
  Reference: WBPaper00004703
  Remark: Predicted SNP: Psnp=0.9174 VarI1=T
    Enzymes. SNP detectable only by sequencing.
    [20040130 db] this Locus was previously named snp_K10E9.2
    [20040130 db] this Allele was previously named snp_K10E9.2
    [20090224 db] original Wicks name : K10E9:9976..10856@442 Psnp=0.9174 VarI1=T
    [20090224 db] original Wicks id : vd48g11.s1@379,t,51
  Method: SNP_Wicks