WormBase Tree Display for Variation: WBVar00245595
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WBVar00245595 | Evidence | Paper_evidence | WBPaper00004703 | ||
---|---|---|---|---|---|
Name | Public_name | WBVar00245595 | |||
Other_name | snp_K10D3[2] | ||||
H37N21.1.1:c.937-144del | |||||
HGVSg | CHROMOSOME_I:g.7142680del | ||||
Sequence_details | SMap | S_parent | Sequence | K10D3 | |
Flanking_sequences | gcagaataccaaatttttaaaaaaa | ttgagtttttgagaaatgaatagaa | |||
Mapping_target | K10D3 | ||||
Type_of_mutation | Deletion | A | |||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004602 | From_analysis | SNP_Wicks | ||
Analysis | SNP_Wicks | ||||
Status | Live | ||||
Affects | Gene | WBGene00010427 | |||
Transcript | H37N21.1.1 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | H37N21.1.1:c.937-144del | ||||
Intron_number | 9/15 | ||||
Reference | WBPaper00004703 | ||||
Remark | Predicted SNP: Psnp=0.9221 VarD1=A | ||||
Enzymes. SNP detectable only by sequencing. | |||||
[20040130 db] this Locus was previously named snp_K10D3.2 | |||||
[20040130 db] this Allele was previously named snp_K10D3.2 | |||||
[20090224 db] original Wicks name : K10D3:26776..28534@1157 Psnp=0.9221 VarD1=A | |||||
[20090224 db] original Wicks id : eam37f09.s1@250,-,59 | |||||
Method | SNP_Wicks |