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WormBase Tree Display for Variation: WBVar00245588

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Name Class

WBVar00245588EvidencePaper_evidenceWBPaper00004703
NamePublic_nameWBVar00245588
Other_namesnp_K10B3[1]
cewivar00271558
K10B3.7.1:c.240+9A>T
HGVSgCHROMOSOME_X:g.3113073T>A
Sequence_detailsSMapS_parentSequenceK10B3
Flanking_sequencesatattaggtgaaatctaattggaaaaattctaccttgatcttgtgctggg
Mapping_targetK10B3
Type_of_mutationSubstitutionTA
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
RFLP
Natural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00004602From_analysisMillion_mutation_project_reanalysis
WBStrain00022850From_analysisMillion_mutation_project_reanalysis
WBStrain00022868From_analysisMillion_mutation_project_reanalysis
WBStrain00022878From_analysisMillion_mutation_project_reanalysis
WBStrain00022886From_analysisMillion_mutation_project_reanalysis
WBStrain00023072From_analysisMillion_mutation_project_reanalysis
WBStrain00023139From_analysisMillion_mutation_project_reanalysis
WBStrain00027648From_analysisMillion_mutation_project_reanalysis
WBStrain00027660From_analysisMillion_mutation_project_reanalysis
AnalysisSNP_Wicks
Million_mutation_project_reanalysis
StatusLive
AffectsGeneWBGene00305526
WBGene00001685
TranscriptK10B3.13
K10B3.7.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScK10B3.7.1:c.240+9A>T
Intron_number2/4
ReferenceWBPaper00004703
RemarkPredicted SNP: Psnp=0.9427 VarS=AT
Enzymes. SNP detectable only by sequencing.
[20040130 db] this Locus was previously named snp_K10B3.1
[20040130 db] this Allele was previously named snp_K10B3.1
[20090224 db] original Wicks name : K10B3:9222..10013@478 Psnp=0.9427 VarS=AT
[20090224 db] original Wicks id : vr89a05.s1@253,a,59
[20090224 db] Snip-SNP
MethodSNP_Wicks