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WormBase Tree Display for Variation: WBVar00245576

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Name Class

WBVar00245576EvidencePaper_evidenceWBPaper00004703
NamePublic_nameWBVar00245576
Other_namesnp_K09E9[5]
K09E9.4.1:c.91-194_91-193insGTGTG
HGVSgCHROMOSOME_X:g.15629828_15629829insCACAC
Sequence_detailsSMapS_parentSequenceK09E9
Flanking_sequencesttggttttgtgactctgccgtctgatcacagtgagccttcatgtctgacattcgctccgcaagttttgctgcatcaggatcgttgatctcgacctgaaaaaaacatctttagcacatcttattgaatcatgtgcctgatgagcgcaaaaaatgatcccattatggctctcgaatttcaatttttccctggtaactctatactagacatgtttgtggcgtaggggagtagcagcagcagcacacacacacacacacacacacacacacacacacacacacacacacaattttgacgtcacgataaatttttt
Mapping_targetK09E9
Type_of_mutationInsertionCACAC
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
RFLP
Natural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00004602From_analysisSNP_Wicks
AnalysisSNP_Wicks
StatusLive
AffectsGeneWBGene00044143
WBGene00201206
TranscriptK09E9.12
K09E9.4.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScK09E9.4.1:c.91-194_91-193insGTGTG
Intron_number2/4
ReferenceWBPaper00004703
RemarkPredicted SNP: Psnp=0.6662 VarI5=CACAC
Enzymes. Bristol-specific: [MluCI,Sse9I,TasI,TseCI,Tsp509I,TspEI]. CB4856-specific [none].
[20040130 db] this Locus was previously named snp_K09E9.5
[20040130 db] this Allele was previously named snp_K09E9.5
[20090224 db] original Wicks name : K09E9:17971..18917@196 Psnp=0.6662 VarI5=CACAC
[20090224 db] original Wicks id : yw07b04.s1@679,c,33
[20090224 db] Snip-SNP
MethodSNP_Wicks