WormBase Tree Display for Variation: WBVar00245566
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WBVar00245566 | Evidence | Paper_evidence | WBPaper00004703 | ||
---|---|---|---|---|---|
Name | Public_name | WBVar00245566 | |||
Other_name | snp_K09C4[3] | ||||
cewivar00271694 | |||||
CE04737:p.Ala54Thr | |||||
K09C4.9.1:c.160G>A | |||||
HGVSg | CHROMOSOME_X:g.3271567C>T | ||||
Sequence_details | SMap | S_parent | Sequence | K09C4 | |
Flanking_sequences | ttctgctttttgggcaaagcttctg | catgtcttgtccattcgccacacct | |||
Mapping_target | K09C4 | ||||
Type_of_mutation | Substitution | C | T | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004602 | From_analysis | Million_mutation_project_reanalysis | ||
WBStrain00022886 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00023139 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00027648 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00027660 | From_analysis | Million_mutation_project_reanalysis | |||
Analysis | SNP_Wicks | ||||
Million_mutation_project_reanalysis | |||||
Status | Live | ||||
Affects | Gene | WBGene00019553 | |||
Transcript | K09C4.9.1 (11) | ||||
Reference | WBPaper00004703 | ||||
Remark | Predicted SNP: Psnp=0.9427 VarS=CT | ||||
Enzymes. SNP detectable only by sequencing. | |||||
[20040130 db] this Locus was previously named snp_K09C4.3 | |||||
[20040130 db] this Allele was previously named snp_K09C4.3 | |||||
[20090224 db] original Wicks name : K09C4:4912..5502@343 Psnp=0.9427 VarS=CT | |||||
[20090224 db] original Wicks id : hz76f03.s1@291,t,59 | |||||
Method | SNP_Wicks |