WormBase Tree Display for Variation: WBVar00245553
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WBVar00245553 | Evidence | Paper_evidence | WBPaper00004703 | ||
---|---|---|---|---|---|
Name | Public_name | WBVar00245553 | |||
Other_name | snp_K08G2[4] | ||||
cewivar00247613 | |||||
K08G2.5.1:c.28G>A | |||||
CE34491:p.Ala10Thr | |||||
HGVSg | CHROMOSOME_V:g.15858358C>T | ||||
Sequence_details | SMap | S_parent | Sequence | K08G2 | |
Flanking_sequences | actgtgtagaagttttgaataaacttcgtcggaag | gaagaagctaaggctagtcgagcac | |||
Mapping_target | K08G2 | ||||
Type_of_mutation | Substitution | C | T | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004602 | From_analysis | Million_mutation_project_reanalysis | ||
WBStrain00023072 | From_analysis | Million_mutation_project_reanalysis | |||
Analysis | SNP_Wicks | ||||
Million_mutation_project_reanalysis | |||||
Status | Live | ||||
Affects | Gene | WBGene00005364 | |||
Transcript | K08G2.5.1 (12) | ||||
Reference | WBPaper00004703 | ||||
Remark | Predicted SNP: Psnp=0.9427 VarS=CT | ||||
Enzymes. SNP detectable only by sequencing. | |||||
[20040130 db] this Locus was previously named snp_K08G2.4 | |||||
[20040130 db] this Allele was previously named snp_K08G2.4 | |||||
[20090224 db] original Wicks name : K08G2:18438..19409@685 Psnp=0.9427 VarS=CT | |||||
[20090224 db] original Wicks id : eam54b06.s1@203,t,59 | |||||
Method | SNP_Wicks |