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WormBase Tree Display for Variation: WBVar00245542

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Name Class

WBVar00245542NamePublic_nameWBVar00245542
Other_namesnp_K08E4[1]
haw154601
cewivar00209421
CE40463:p.Tyr145=
K08E4.7.1:c.435T>C
HGVSgCHROMOSOME_IV:g.12076302T>C
Sequence_detailsSMapS_parentSequenceK08E4
Flanking_sequencesccaaagtcaaggtgacaaaactctaggatatcgaaaaagaaagatgcttg
Mapping_targetK08E4
Type_of_mutationSubstitutionTC
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
Strain (12)
PersonWBPerson4037
AnalysisSNP_Wicks
WGS_Yanai
Million_mutation_project_reanalysis
HistoryAcquires_mergeWBVar00574466
StatusLive
AffectsGeneWBGene00045036
TranscriptK08E4.7.1VEP_consequencesynonymous_variant
VEP_impactLOW
HGVScK08E4.7.1:c.435T>C
HGVSpCE40463:p.Tyr145=
cDNA_position455
CDS_position435
Protein_position145
Exon_number3/5
Codon_changetaT/taC
Amino_acid_changeY
ReferenceWBPaper00038208
WBPaper00004703
RemarkPredicted SNP: Psnp=0.9427 VarS=CT
Enzymes. SNP detectable only by sequencing.
[20040130 db] this Locus was previously named snp_K08E4.1
[20040130 db] this Allele was previously named snp_K08E4.1
[20090224 db] original Wicks name : K08E4:22597..23536@323 Psnp=0.9427 VarS=CT
[20090224 db] original Wicks id : yy48d05.s1@269,c,59
MethodSNP_Wicks