WormBase Tree Display for Variation: WBVar00245536

WBVar00245536 Evidence: Paper_evidence: WBPaper00004703
  Name: Public_name: WBVar00245536
    Other_name: snp_K08D12[1]
      CE21047:p.Ala300SerfsTer14
      K08D12.6.1:c.896dup
    HGVSg: CHROMOSOME_IV:g.1721823dup
  Sequence_details: SMap: S_parent: Sequence: K08D12
    Flanking_sequences: cttacggagacgagcaagtcacccc agccccagctgctgctccagctccagccgatgccccagttgagcaagccccagtcgccgtcccagctccagctccagctgccg
    Mapping_target: K08D12
    Type_of_mutation: Insertion: C
    SeqStatus: Sequenced
  Variation_type: SNP
    Predicted_SNP
    Natural_variant
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00004602 From_analysis: SNP_Wicks
    Analysis: SNP_Wicks
    Status: Live
  Affects: Gene: WBGene00019540
    Transcript: K08D12.6.1 VEP_consequence: frameshift_variant
        VEP_impact: HIGH
        HGVSc: K08D12.6.1:c.896dup
        HGVSp: CE21047:p.Ala300SerfsTer14
        cDNA_position: 983-984
        CDS_position: 896-897
        Protein_position: 299
        Exon_number: 3/4
        Codon_change: cca/ccCa
        Amino_acid_change: P/PX
  Reference: WBPaper00004703
  Remark: Predicted SNP: Psnp=0.5217 VarI1=C
    Enzymes. SNP detectable only by sequencing.
    [20040130 db] this Locus was previously named snp_K08D12.1
    [20040130 db] this Allele was previously named snp_K08D12.1
    [20090224 db] original Wicks name : K08D12:26777..27441@125 Psnp=0.5217 VarI1=C
    [20090224 db] original Wicks id : yy41b08.s1@470,c,30
  Method: SNP_Wicks