WormBase Tree Display for Variation: WBVar00245462

WBVar00245462 Name: Public_name: WBVar00245462
    Other_name: snp_K06B9[2]
      haw152279
      cewivar00038581
      F30B5.4b.1:c.5+43C>T
    HGVSg: CHROMOSOME_IV:g.4207435C>T
  Sequence_details: SMap: S_parent: Sequence: K06B9
    Flanking_sequences: tttgtattttttgtgtaattttatg gattattactatatccttgttccaa
    Mapping_target: K06B9
    Type_of_mutation: Substitution: C T
    SeqStatus: Sequenced
  Variation_type: SNP
    Predicted_SNP
    Natural_variant
  Origin: Species: Caenorhabditis elegans
    Strain (25)
    Person: WBPerson4037
    Analysis: SNP_Wicks
      WGS_Yanai
      Million_mutation_project_reanalysis
    History: Acquires_merge: WBVar00572144
    Status: Live
  Affects: Gene: WBGene00017934
    Transcript: F30B5.4b.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: F30B5.4b.1:c.5+43C>T
        Intron_number: 1/7
  Reference: WBPaper00038208
    WBPaper00004703
  Remark: Predicted SNP: Psnp=0.9328 VarS=CT
    Enzymes. SNP detectable only by sequencing.
    [20040130 db] this Locus was previously named snp_K06B9.2
    [20040130 db] this Allele was previously named snp_K06B9.2
    [20090224 db] original Wicks name : K06B9:20670..21533@399 Psnp=0.9328 VarS=CT
    [20090224 db] original Wicks id : vl29e03.s1@321,t,47
  Method: SNP_Wicks