WormBase Tree Display for Variation: WBVar00245324
expand all nodes | collapse all nodes | view schema
WBVar00245324 | Evidence | Paper_evidence | WBPaper00004703 | ||
---|---|---|---|---|---|
Name | Public_name | WBVar00245324 | |||
Other_name | snp_H10D18[4] | ||||
cewivar00698650 | |||||
H10D18.5a.1:c.51+3099del | |||||
HGVSg | CHROMOSOME_V:g.3828510del | ||||
Sequence_details | SMap | S_parent | Sequence | H10D18 | |
Flanking_sequences | caattttgaaactgtttatatatat | tttttttgaaatttttttataaatc | |||
Mapping_target | H10D18 | ||||
Type_of_mutation | Deletion | A | |||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004602 | From_analysis | Million_mutation_project_reanalysis | ||
Analysis | SNP_Wicks | ||||
Million_mutation_project_reanalysis | |||||
Status | Live | ||||
Affects | Gene | WBGene00019180 | |||
Transcript | H10D18.5a.1 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | H10D18.5a.1:c.51+3099del | ||||
Intron_number | 2/8 | ||||
Reference | WBPaper00004703 | ||||
Remark | Predicted SNP: Psnp=0.9221 VarD1=A | ||||
Enzymes. SNP detectable only by sequencing. | |||||
[20040130 db] this Locus was previously named snp_H10D18.4 | |||||
[20040130 db] this Allele was previously named snp_H10D18.4 | |||||
[20090224 db] original Wicks name : H10D18:19231..20171@706 Psnp=0.9221 VarD1=A | |||||
[20090224 db] original Wicks id : eam67a09.s1@162,-,59 | |||||
Method | SNP_Wicks |