WormBase Tree Display for Variation: WBVar00245308
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| WBVar00245308 | Evidence | Paper_evidence | WBPaper00004703 | ||
|---|---|---|---|---|---|
| Name | Public_name | WBVar00245308 | |||
| Other_name | snp_H05L03[1] | ||||
| cewivar00273895 | |||||
| Sequence_details | SMap | S_parent | Sequence | H05L03 | |
| Flanking_sequences | tcaatggctcttataaaaaccgtcg | ctcgacgcgttttcaactcattctt | |||
| Mapping_target | H05L03 | ||||
| Type_of_mutation | Substitution | A | T | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| RFLP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain | WBStrain00004602 | From_analysis | Million_mutation_project_reanalysis | ||
| Analysis | SNP_Wicks | ||||
| Million_mutation_project_reanalysis | |||||
| Status | Live | ||||
| Reference | WBPaper00004703 | ||||
| Remark | Predicted SNP: Psnp=0.6951 VarS=AT | ||||
| Enzymes. Bristol-specific: [AccI,Acs1371I,Acs1372I,Acs1373I,Acs1421I,Acs1422I,BsmEI,BspMKI,BstZ16I,BtgAI,CglAII,ChuII,CviBI,CviCI,CviDI,CviEI,CviFI,CviGI,CviSIII,DsaVI,EsaBC3I,FblI,FnuAI,HgiCIII,HgiDII,HhaII,Hin1160II,Hin1161II,HinJCI,HincII,HindII,HinfI,Hpy166II,Hpy26II,Hpy8I,HpyAIV,HpyBII,HpyF10II,HpyF14II,HpyF14III,HpyF16I,HpyF18I,HpyF23I,HpyF24I,HpyF26III,HpyF2II,HpyF30I,HpyF35I,HpyF38I,HpyF40II,HpyF42IV,HpyF44I,HpyF45I,HpyF46III,HpyF49I,HpyF49III,HpyF50I,HpyF52I,HpyF55II,HpyF59III,HpyF60I,HpyF62II,HpyF64I,HpyF65II,HpyF66IV,HpyF71I,HpyF71III,HpyF72III,HpyF73II,HpyF7III,HpyIV,HpyJP26II,HpyV,KoyI,MlyI,MnnI,NcaI,NopI,NovII,NsiHI,OmiBII,PleI,PpaAII,PpsI,Psp32I,Psp33I,Psp89I,RflFI,RheI,RhpI,Rrh4273I,RrhI,RroI,Rtr63I,RtrI,SalI,SchI,SscL1I,Taq20I,TaqI,Tbr51I,TfiA3I,TfiI,TfiTok4A2I,TfiTok6A1I,TflI,Tsc4aI,Tsp32I,Tsp32II,Tsp358I,Tsp505I,Tsp510I,TspAK13D21I,TspAK16D24I,TspNI,TspVi4AI,TspVil3I,Tth24I,TthHB8I,TthRQI,Uba89I,XamI,XciI,XmiI]. CB4856-specific [none]. | |||||
| [20040130 db] this Locus was previously named snp_H05L03.1 | |||||
| [20040130 db] this Allele was previously named snp_H05L03.1 | |||||
| [20090224 db] original Wicks name : H05L03:5450..6391@495 Psnp=0.6951 VarS=AT | |||||
| [20090224 db] original Wicks id : eam57e02.s1@419,t,32 | |||||
| [20090224 db] Snip-SNP | |||||
| Method | SNP_Wicks |
