WormBase Tree Display for Variation: WBVar00245300

WBVar00245300 Evidence: Paper_evidence: WBPaper00004703
  Name: Public_name: WBVar00245300
    Other_name: snp_H05B21[2]
      CE34574:p.Lys22=
      H27D07.5.1:c.66A>G
    HGVSg: CHROMOSOME_V:g.2952137T>C
  Sequence_details: SMap: S_parent: Sequence: H05B21
    Flanking_sequences: atgttttctcgaatttgcaaagtga tttgccgtcgatttttgaattcctt
    Mapping_target: H05B21
    Type_of_mutation: Substitution: T C
    SeqStatus: Sequenced
  Variation_type: SNP
    Predicted_SNP
    RFLP
    Natural_variant
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00004602 From_analysis: SNP_Wicks
    Analysis: SNP_Wicks
    Status: Live
  Affects: Gene: WBGene00005869
    Transcript: H27D07.5.1 VEP_consequence: synonymous_variant
        VEP_impact: LOW
        HGVSc: H27D07.5.1:c.66A>G
        HGVSp: CE34574:p.Lys22=
        cDNA_position: 66
        CDS_position: 66
        Protein_position: 22
        Exon_number: 1/5
        Codon_change: aaA/aaG
        Amino_acid_change: K
  Reference: WBPaper00004703
  Remark: Predicted SNP: Psnp=0.9420 VarS=CT
    Enzymes. SNP detectable only by sequencing.
    [20040130 db] this Locus was previously named snp_H05B21.2
    [20040130 db] this Allele was previously named snp_H05B21.2
    [20090224 db] original Wicks name : H05B21:1..829@156 Psnp=0.9420 VarS=CT
    [20090224 db] original Wicks id : yw14b03.s1@128,c,56
    [20090224 db] Snip-SNP
  Method: SNP_Wicks