WormBase Tree Display for Variation: WBVar00245260

WBVar00245260 Evidence: Paper_evidence: WBPaper00004703
  Name: Public_name: WBVar00245260
    Other_name: snp_F59A3[1]
      F59A3.7.1:c.256_257insT
      CE45601:p.Ala86ValfsTer21
    HGVSg: CHROMOSOME_I:g.5518140_5518141insA
  Sequence_details: SMap: S_parent: Sequence: F59A3
    Flanking_sequences: actattgaatttaccgtataaactg ctaaaactccaaaaatttgtttgga
    Mapping_target: F59A3
    Type_of_mutation: Insertion: A
    SeqStatus: Sequenced
  Variation_type: SNP
    Predicted_SNP
    RFLP
    Natural_variant
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00004602 From_analysis: SNP_Wicks
    Analysis: SNP_Wicks
    Status: Live
  Affects: Gene: WBGene00019080
    Transcript: F59A3.7.1 VEP_consequence: frameshift_variant
        VEP_impact: HIGH
        HGVSc: F59A3.7.1:c.256_257insT
        HGVSp: CE45601:p.Ala86ValfsTer21
        cDNA_position: 260-261
        CDS_position: 256-257
        Protein_position: 86
        Exon_number: 5/9
        Codon_change: gca/gTca
        Amino_acid_change: A/VX
  Reference: WBPaper00004703
  Remark: Predicted SNP: Psnp=0.5217 VarI1=A
    Enzymes. SNP detectable only by sequencing.
    [20040130 db] this Locus was previously named snp_F59A3.1
    [20040130 db] this Allele was previously named snp_F59A3.1
    [20090224 db] original Wicks name : F59A3:16806..17644@654 Psnp=0.5217 VarI1=A
    [20090224 db] original Wicks id : yx25a06.s1@130,a,30
    [20090224 db] Snip-SNP
  Method: SNP_Wicks