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WormBase Tree Display for Variation: WBVar00245213

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Name Class

WBVar00245213EvidencePaper_evidenceWBPaper00004703
NamePublic_nameWBVar00245213
Other_namesnp_F57G8[3]
cewivar00478364
F57G8.8:n.642-846A>G
HGVSgCHROMOSOME_V:g.16322048T>C
Sequence_detailsSMapS_parentSequenceF57G8
Flanking_sequencescccatcgtggtgagacccttcgtgggagacccttcgtggtgagacccaaa
Mapping_targetF57G8
Type_of_mutationSubstitutionTC
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
RFLP
Natural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00004602From_analysisSNP_Wicks
WBStrain00022850From_analysisMillion_mutation_project_reanalysis
WBStrain00022930From_analysisMillion_mutation_project_reanalysis
WBStrain00023072From_analysisMillion_mutation_project_reanalysis
WBStrain00023191From_analysisMillion_mutation_project_reanalysis
AnalysisSNP_Wicks
Million_mutation_project_reanalysis
StatusLive
AffectsGeneWBGene00005747
PseudogeneF57G8.8VEP_consequenceintron_variant,non_coding_transcript_variant
VEP_impactMODIFIER
HGVScF57G8.8:n.642-846A>G
Intron_number4/5
ReferenceWBPaper00004703
RemarkPredicted SNP: Psnp=0.8657 VarS=CT
Enzymes. Bristol-specific: [AsuHPI,HphI,NgoBVIII,NgoDVIII,NgoJVIII,NgoMVIII,SspD5I]. CB4856-specific [none].
[20040130 db] this Locus was previously named snp_F57G8.3
[20040130 db] this Allele was previously named snp_F57G8.3
[20090224 db] original Wicks name : F57G8:4557..5541@428 Psnp=0.8657 VarS=CT
[20090224 db] original Wicks id : eam54h07.s1@348,c,38
[20090224 db] Snip-SNP
MethodSNP_Wicks