WormBase Tree Display for Variation: WBVar00245044
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WBVar00245044 | Name | Public_name | WBVar00245044 | ||
---|---|---|---|---|---|
Other_name | snp_F54B8[1] | ||||
haw172330 | |||||
cewivar00247323 | |||||
F54B8.2.1:c.229T>A | |||||
CE16104:p.Leu77Met | |||||
HGVSg | CHROMOSOME_V:g.15812510T>A | ||||
Sequence_details | SMap | S_parent | Sequence | F54B8 | |
Flanking_sequences | ggttgcagtttctacctcggatttt | tgagaaaattcccattcgtatatca | |||
Mapping_target | F54B8 | ||||
Type_of_mutation | Substitution | T | A | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004602 | From_analysis | SNP_Wicks | ||
WGS_Yanai | |||||
Million_mutation_project_reanalysis | |||||
WBStrain00022850 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00023072 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00023191 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00023286 | From_analysis | Million_mutation_project_reanalysis | |||
Person | WBPerson4037 | ||||
Analysis | SNP_Wicks | ||||
WGS_Yanai | |||||
Million_mutation_project_reanalysis | |||||
History | Acquires_merge | WBVar00592195 | |||
Status | Live | ||||
Affects | Gene | WBGene00010017 | |||
Transcript | F54B8.2.1 (12) | ||||
Reference | WBPaper00038208 | ||||
WBPaper00004703 | |||||
Remark | Predicted SNP: Psnp=0.8928 VarS=AT | ||||
Enzymes. SNP detectable only by sequencing. | |||||
[20040130 db] this Locus was previously named snp_F54B8.1 | |||||
[20040130 db] this Allele was previously named snp_F54B8.1 | |||||
[20090224 db] original Wicks name : F54B8:1436..2422@564 Psnp=0.8928 VarS=AT | |||||
[20090224 db] original Wicks id : eam54e06.s1@344,a,33 eam54f12.s1@350,a,47 | |||||
Method | SNP_Wicks |