WormBase Tree Display for Variation: WBVar00245034

WBVar00245034 Evidence: Paper_evidence: WBPaper00004703
  Name: Public_name: WBVar00245034
    Other_name: snp_F53H4[2]
      cewivar00064485
      F53H4.5.1:c.1357-253A>G
    HGVSg: CHROMOSOME_X:g.15884693A>G
  Sequence_details: SMap: S_parent: Sequence: F53H4
    Flanking_sequences: acacacacagagctactgatttcac gcaagctgcggaactcatatcgtgt
    Mapping_target: F53H4
    Type_of_mutation: Substitution: A G
    SeqStatus: Sequenced
  Variation_type: SNP
    Predicted_SNP
    RFLP
    Natural_variant
  Origin: Species: Caenorhabditis elegans
    Strain (31)
    Analysis: SNP_Wicks
      Million_mutation_project_reanalysis
    Status: Live
  Affects: Gene: WBGene00010010
    Transcript: F53H4.5.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: F53H4.5.1:c.1357-253A>G
        Intron_number: 6/7
  Reference: WBPaper00004703
  Remark: Predicted SNP: Psnp=0.9328 VarS=AG
    Enzymes. SNP detectable only by sequencing.
    [20040130 db] this Locus was previously named snp_F53H4.2
    [20040130 db] this Allele was previously named snp_F53H4.2
    [20090224 db] original Wicks name : F53H4:33058..33981@350 Psnp=0.9328 VarS=AG
    [20090224 db] original Wicks id : yw09d11.s1@498,g,47
    [20090224 db] Snip-SNP
  Method: SNP_Wicks