WormBase Tree Display for Variation: WBVar00244845
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WBVar00244845 | Evidence | Paper_evidence | WBPaper00004703 | ||
---|---|---|---|---|---|
Name | Public_name | WBVar00244845 | |||
Other_name | snp_F46F2[3] | ||||
cewivar00063411 | |||||
F46F2.5.1:c.739-22T>C | |||||
HGVSg | CHROMOSOME_X:g.15266249T>C | ||||
Sequence_details | SMap | S_parent | Sequence | F46F2 | |
Flanking_sequences | agtgtagttactattttcaaatagg | agttgactgcaaaattttcagagta | |||
Mapping_target | F46F2 | ||||
Type_of_mutation | Substitution | T | C | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00000032 | From_analysis | Million_mutation_project_reanalysis | ||
WBStrain00004602 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00006622 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00022883 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00022887 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00027652 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00027662 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00031113 | From_analysis | Million_mutation_project_reanalysis | |||
Analysis | SNP_Wicks | ||||
Million_mutation_project_reanalysis | |||||
Status | Live | ||||
Affects | Gene | WBGene00009789 | |||
Transcript | F46F2.5.1 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | F46F2.5.1:c.739-22T>C | ||||
Intron_number | 7/9 | ||||
Reference | WBPaper00004703 | ||||
Remark | Predicted SNP: Psnp=0.7699 VarS=CT | ||||
Enzymes. SNP detectable only by sequencing. | |||||
[20040130 db] this Locus was previously named snp_F46F2.3 | |||||
[20040130 db] this Allele was previously named snp_F46F2.3 | |||||
[20090224 db] original Wicks name : F46F2:23486..24472@771 Psnp=0.7699 VarS=CT | |||||
[20090224 db] original Wicks id : eam43e11.s1@145,c,34 | |||||
Method | SNP_Wicks |