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WormBase Tree Display for Variation: WBVar00244845

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Name Class

WBVar00244845EvidencePaper_evidenceWBPaper00004703
NamePublic_nameWBVar00244845
Other_namesnp_F46F2[3]
cewivar00063411
F46F2.5.1:c.739-22T>C
HGVSgCHROMOSOME_X:g.15266249T>C
Sequence_detailsSMapS_parentSequenceF46F2
Flanking_sequencesagtgtagttactattttcaaataggagttgactgcaaaattttcagagta
Mapping_targetF46F2
Type_of_mutationSubstitutionTC
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00000032From_analysisMillion_mutation_project_reanalysis
WBStrain00004602From_analysisMillion_mutation_project_reanalysis
WBStrain00006622From_analysisMillion_mutation_project_reanalysis
WBStrain00022883From_analysisMillion_mutation_project_reanalysis
WBStrain00022887From_analysisMillion_mutation_project_reanalysis
WBStrain00027652From_analysisMillion_mutation_project_reanalysis
WBStrain00027662From_analysisMillion_mutation_project_reanalysis
WBStrain00031113From_analysisMillion_mutation_project_reanalysis
AnalysisSNP_Wicks
Million_mutation_project_reanalysis
StatusLive
AffectsGeneWBGene00009789
TranscriptF46F2.5.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF46F2.5.1:c.739-22T>C
Intron_number7/9
ReferenceWBPaper00004703
RemarkPredicted SNP: Psnp=0.7699 VarS=CT
Enzymes. SNP detectable only by sequencing.
[20040130 db] this Locus was previously named snp_F46F2.3
[20040130 db] this Allele was previously named snp_F46F2.3
[20090224 db] original Wicks name : F46F2:23486..24472@771 Psnp=0.7699 VarS=CT
[20090224 db] original Wicks id : eam43e11.s1@145,c,34
MethodSNP_Wicks