WormBase Tree Display for Variation: WBVar00244836
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WBVar00244836 | Evidence | Paper_evidence | WBPaper00004703 | ||
---|---|---|---|---|---|
Name | Public_name | WBVar00244836 | |||
Other_name | snp_F46A9[6] | ||||
Sequence_details | SMap | S_parent | Sequence | F46A9 | |
Flanking_sequences | ctgcgtctcttcctttgtgtgtaca | tgtttcctcgcttctctacactgtt | |||
Mapping_target | F46A9 | ||||
Type_of_mutation | Substitution | C | T | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
RFLP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004602 | From_analysis | SNP_Wicks | ||
Analysis | SNP_Wicks | ||||
Status | Live | ||||
Affects | Gene | WBGene00305417 | |||
Transcript | F46A9.15 | ||||
Reference | WBPaper00004703 | ||||
Remark | Predicted SNP: Psnp=0.8806 VarS=CT | ||||
Enzymes. Bristol-specific: [Bst4CI,Hpy166II,Hpy8I,HpyBII,HpyCH4III,HpyF12I,HpyF14II,HpyF20I,HpyF22I,HpyF35III,HpyF40I,HpyF41I,HpyF42II,HpyF46I,HpyF46III,HpyF48II,HpyF49III,HpyF50I,HpyF51II,HpyF54I,HpyF55I,HpyF56I,HpyF58I,HpyF5II,HpyF62I,HpyF64II,HpyF65I,HpyF68I,HpyF69I,HpyF74I,HpyF7III,HpyF9III,TaaI,TspRI]. CB4856-specific [none]. | |||||
[20040130 db] this Locus was previously named snp_F46A9.6 | |||||
[20040130 db] this Allele was previously named snp_F46A9.6 | |||||
[20090224 db] original Wicks name : F46A9:28591..29436@584 Psnp=0.8806 VarS=CT | |||||
[20090224 db] original Wicks id : yx31f07.s1@210,t,39 | |||||
[20090224 db] Snip-SNP | |||||
Method | SNP_Wicks |