WormBase Tree Display for Variation: WBVar00244823

WBVar00244823 Evidence: Paper_evidence: WBPaper00004703
  Name: Public_name: WBVar00244823
    Other_name: snp_F45E4[2]
      F45E4.3a.1:c.26735-29dup
      F45E4.3e.1:c.3662-29dup
      F45E4.3d.1:c.7895-29dup
    HGVSg: CHROMOSOME_IV:g.7627942dup
  Sequence_details: SMap: S_parent: Sequence: F45E4
    Flanking_sequences: gaactggaaaacttgtctttttttt aaatatctaaatcatttaaattttt
    Mapping_target: F45E4
    Type_of_mutation: Insertion: T
    SeqStatus: Sequenced
  Variation_type: SNP
    Predicted_SNP
    Natural_variant
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00004602 From_analysis: SNP_Wicks
    Analysis: SNP_Wicks
    Status: Live
  Affects: Gene: WBGene00018468
    Transcript: F45E4.3d.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: F45E4.3d.1:c.7895-29dup
        Intron_number: 24/24
      F45E4.3e.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: F45E4.3e.1:c.3662-29dup
        Intron_number: 9/10
      F45E4.3a.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: F45E4.3a.1:c.26735-29dup
        Intron_number: 39/40
  Reference: WBPaper00004703
  Remark: Predicted SNP: Psnp=0.8699 VarI1=T
    Enzymes. SNP detectable only by sequencing.
    [20040130 db] this Locus was previously named snp_F45E4.2
    [20040130 db] this Allele was previously named snp_F45E4.2
    [20090224 db] original Wicks name : F45E4:21076..22041@414 Psnp=0.8699 VarI1=T
    [20090224 db] original Wicks id : eam65d09.s1@483,t,41
  Method: SNP_Wicks