WormBase Tree Display for Variation: WBVar00244818
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| WBVar00244818 | Evidence | Paper_evidence | WBPaper00004703 | ||
|---|---|---|---|---|---|
| Name | Public_name | WBVar00244818 | |||
| Other_name | snp_F45D11[1] | ||||
| cewivar00176203 | |||||
| Sequence_details | SMap | S_parent | Sequence | F45D11 | |
| Flanking_sequences | gcaggcctatttcaagcttggctca | ctttctactcaactcgaccaagtta | |||
| Mapping_target | F45D11 | ||||
| Type_of_mutation | Substitution | G | T | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| RFLP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain | WBStrain00004602 | From_analysis | Million_mutation_project_reanalysis | ||
| Analysis | SNP_Wicks | ||||
| Million_mutation_project_reanalysis | |||||
| Status | Live | ||||
| Affects | Gene | WBGene00305498 | |||
| Transcript | K02E7.15 | ||||
| Reference | WBPaper00004703 | ||||
| Remark | Predicted SNP: Psnp=0.9407 VarS=GT | ||||
| Enzymes. Bristol-specific: [AluI,BlpI,Bpu1102I,BpuGCI,BsaLI,BscPI,BseMII,Bsp1720I,Bst295I,BstDEI,BstJZ301I,CelII,CviJI,CviKI,CviLI,CviMI,CviNI,CviOI,CviTI,DdeI,HpyCH4II,HpyF11I,HpyF13II,HpyF19I,HpyF21I,HpyF22II,HpyF24II,HpyF25I,HpyF27I,HpyF30II,HpyF32I,HpyF34I,HpyF37I,HpyF3I,HpyF41II,HpyF4II,HpyF59I,HpyF5I,HpyF60II,HpyF64V,HpyF66II,HpyF67I,HpyF68II,HpyF6III,HpyF70I,HpyF72II,HpyF7I,HpyF9II,HpyHPK5I,MarI,MltI,OtuI,OtuNI,OxaI,Uba1221I,Uba1222I,Uba1284I,Uba1320I,Uba1433I,Uba1441I]. CB4856-specific [none]. | |||||
| [20040130 db] this Locus was previously named snp_F45D11.1 | |||||
| [20040130 db] this Allele was previously named snp_F45D11.1 | |||||
| [20090224 db] original Wicks name : F45D11:10963..11583@508 Psnp=0.9407 VarS=GT | |||||
| [20090224 db] original Wicks id : yy46c11.s1@368,t,53 | |||||
| [20090224 db] Snip-SNP | |||||
| Method | SNP_Wicks |
