WormBase Tree Display for Variation: WBVar00244793
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WBVar00244793 | Evidence | Paper_evidence | WBPaper00004703 | ||
---|---|---|---|---|---|
Name | Public_name | WBVar00244793 | |||
Other_name | snp_F44F4[3] | ||||
F44F4.7.1:c.222+76T>G | |||||
HGVSg | CHROMOSOME_II:g.10904135A>C | ||||
Sequence_details | SMap | S_parent | Sequence | F44F4 | |
Flanking_sequences | ttttccgtggattaaaaaaaacgca | gttatagtacaaaactagtccaaaa | |||
Mapping_target | F44F4 | ||||
Type_of_mutation | Substitution | A | C | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
RFLP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004602 | From_analysis | SNP_Wicks | ||
Analysis | SNP_Wicks | ||||
Status | Live | ||||
Affects | Gene | WBGene00005038 | |||
Transcript | F44F4.7.1 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | F44F4.7.1:c.222+76T>G | ||||
Intron_number | 2/6 | ||||
Reference | WBPaper00004703 | ||||
Remark | Predicted SNP: Psnp=0.7349 VarS=AC | ||||
Enzymes. SNP detectable only by sequencing. | |||||
[20040130 db] this Locus was previously named snp_F44F4.3 | |||||
[20040130 db] this Allele was previously named snp_F44F4.3 | |||||
[20090224 db] original Wicks name : F44F4:24673..25340@219 Psnp=0.7349 VarS=AC | |||||
[20090224 db] original Wicks id : yy46e03.s1@671,c,33 | |||||
[20090224 db] Snip-SNP | |||||
Method | SNP_Wicks |