WormBase Tree Display for Variation: WBVar00244756

WBVar00244756 Evidence: Paper_evidence: WBPaper00004703
  Name: Public_name: WBVar00244756
    Other_name: snp_F43A11[1]
      F43A11.1.1:c.246T>C
      CE43280:p.Pro82=
    HGVSg: CHROMOSOME_V:g.11583989T>C
  Sequence_details: SMap: S_parent: Sequence: F43A11
    Flanking_sequences: tttatagcggattttctattttccc ttaatgatagagtcatggcttatca
    Mapping_target: F43A11
    Type_of_mutation: Substitution: T C
    SeqStatus: Sequenced
  Variation_type: SNP
    Predicted_SNP
    Natural_variant
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00004602 From_analysis: SNP_Wicks
    Analysis: SNP_Wicks
    Status: Live
  Affects: Gene: WBGene00005979
    Transcript: F43A11.1.1 VEP_consequence: synonymous_variant
        VEP_impact: LOW
        HGVSc: F43A11.1.1:c.246T>C
        HGVSp: CE43280:p.Pro82=
        cDNA_position: 246
        CDS_position: 246
        Protein_position: 82
        Exon_number: 3/6
        Codon_change: ccT/ccC
        Amino_acid_change: P
  Reference: WBPaper00004703
  Remark: Predicted SNP: Psnp=0.9328 VarS=CT
    Enzymes. SNP detectable only by sequencing.
    [20040130 db] this Locus was previously named snp_F43A11.1
    [20040130 db] this Allele was previously named snp_F43A11.1
    [20090224 db] original Wicks name : F43A11:788..1712@100 Psnp=0.9328 VarS=CT
    [20090224 db] original Wicks id : eam51h08.s1@27,c,47
  Method: SNP_Wicks