WormBase Tree Display for Variation: WBVar00244712

WBVar00244712 Evidence: Paper_evidence: WBPaper00004703
  Name: Public_name: WBVar00244712
    Other_name: snp_F41E7[1]
      F41E7.3.1:c.*13del
    HGVSg: CHROMOSOME_X:g.10283138del
  Sequence_details: SMap: S_parent: Sequence: F41E7
    Flanking_sequences: gacttttgttctgactttccggttt gtattgagcggcttaaagcagaagc
    Mapping_target: F41E7
    Type_of_mutation: Deletion: T
    SeqStatus: Sequenced
  Variation_type: SNP
    Predicted_SNP
    Natural_variant
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00004602 From_analysis: SNP_Wicks
    Analysis: SNP_Wicks
    Status: Live
  Affects: Gene: WBGene00009619
    Transcript: F41E7.3.1 VEP_consequence: 3_prime_UTR_variant
        VEP_impact: MODIFIER
        HGVSc: F41E7.3.1:c.*13del
        cDNA_position: 1261
        Exon_number: 13/13
  Reference: WBPaper00004703
  Remark: Predicted SNP: Psnp=0.9195 VarD1=T
    Enzymes. SNP detectable only by sequencing.
    [20040130 db] this Locus was previously named snp_F41E7.1
    [20040130 db] this Allele was previously named snp_F41E7.1
    [20090224 db] original Wicks name : F41E7:6390..7266@521 Psnp=0.9195 VarD1=T
    [20090224 db] original Wicks id : vr79c03.s1@457,-,53
  Method: SNP_Wicks