WormBase Tree Display for Variation: WBVar00244692
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WBVar00244692 | Name | Public_name | WBVar00244692 | ||
---|---|---|---|---|---|
Other_name | snp_F40G12[3] | ||||
haw171030 | |||||
cewivar00244233 | |||||
F40G12.6.1:c.201+147T>G | |||||
HGVSg | CHROMOSOME_V:g.14272700A>C | ||||
Sequence_details | SMap | S_parent | Sequence | F40G12 | |
Flanking_sequences | tgcaaaagcctattgactttacatc | caagaggcagggactgaagtcgtgc | |||
Mapping_target | F40G12 | ||||
Type_of_mutation | Substitution | A | C | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
RFLP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004602 | From_analysis | SNP_Wicks | ||
WGS_Yanai | |||||
Million_mutation_project_reanalysis | |||||
WBStrain00022850 | From_analysis | Million_mutation_project_reanalysis | |||
Person | WBPerson4037 | ||||
Analysis | SNP_Wicks | ||||
WGS_Yanai | |||||
Million_mutation_project_reanalysis | |||||
History | Acquires_merge | WBVar00590895 | |||
Status | Live | ||||
Affects | Gene | WBGene00009601 | |||
Transcript | F40G12.6.1 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | F40G12.6.1:c.201+147T>G | ||||
Intron_number | 2/6 | ||||
Reference | WBPaper00038208 | ||||
WBPaper00004703 | |||||
Remark | Predicted SNP: Psnp=0.8928 VarS=AC | ||||
Enzymes. SNP detectable only by sequencing. | |||||
[20040130 db] this Locus was previously named snp_F40G12.3 | |||||
[20040130 db] this Allele was previously named snp_F40G12.3 | |||||
[20090224 db] original Wicks name : F40G12:16895..17935@452 Psnp=0.8928 VarS=AC | |||||
[20090224 db] original Wicks id : eam53g12.s1@517,c,35 eam53g12.s2@520,c,38 | |||||
[20090224 db] Snip-SNP | |||||
Method | SNP_Wicks |