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WormBase Tree Display for Variation: WBVar00244692

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Name Class

WBVar00244692NamePublic_nameWBVar00244692
Other_namesnp_F40G12[3]
haw171030
cewivar00244233
F40G12.6.1:c.201+147T>G
HGVSgCHROMOSOME_V:g.14272700A>C
Sequence_detailsSMapS_parentSequenceF40G12
Flanking_sequencestgcaaaagcctattgactttacatccaagaggcagggactgaagtcgtgc
Mapping_targetF40G12
Type_of_mutationSubstitutionAC
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
RFLP
Natural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00004602From_analysisSNP_Wicks
WGS_Yanai
Million_mutation_project_reanalysis
WBStrain00022850From_analysisMillion_mutation_project_reanalysis
PersonWBPerson4037
AnalysisSNP_Wicks
WGS_Yanai
Million_mutation_project_reanalysis
HistoryAcquires_mergeWBVar00590895
StatusLive
AffectsGeneWBGene00009601
TranscriptF40G12.6.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF40G12.6.1:c.201+147T>G
Intron_number2/6
ReferenceWBPaper00038208
WBPaper00004703
RemarkPredicted SNP: Psnp=0.8928 VarS=AC
Enzymes. SNP detectable only by sequencing.
[20040130 db] this Locus was previously named snp_F40G12.3
[20040130 db] this Allele was previously named snp_F40G12.3
[20090224 db] original Wicks name : F40G12:16895..17935@452 Psnp=0.8928 VarS=AC
[20090224 db] original Wicks id : eam53g12.s1@517,c,35 eam53g12.s2@520,c,38
[20090224 db] Snip-SNP
MethodSNP_Wicks