WormBase Tree Display for Variation: WBVar00244673
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| WBVar00244673 | Name | Public_name | WBVar00244673 | ||
|---|---|---|---|---|---|
| Other_name | snp_F40D4[2] | ||||
| haw175070 | |||||
| cewivar00255371 | |||||
| F40D4.14:n.162C>G | |||||
| HGVSg | CHROMOSOME_V:g.17153105G>C | ||||
| Sequence_details | SMap | S_parent | Sequence | F40D4 | |
| Flanking_sequences | caaaatccccaccacgtcggcacga | ttttcaggatctcgtcacgcttcag | |||
| Mapping_target | F40D4 | ||||
| Type_of_mutation | Substitution | G | C | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| RFLP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain (16) | |||||
| Laboratory | AX | ||||
| Person | WBPerson4037 | ||||
| Analysis | SNP_Wicks | ||||
| WGS_De_Bono | |||||
| WGS_Yanai | |||||
| Million_mutation_project_reanalysis | |||||
| History | Acquires_merge | WBVar01276165 | |||
| WBVar00594935 | |||||
| Status | Live | ||||
| Affects | Gene | WBGene00014753 | |||
| Pseudogene | F40D4.14 | VEP_consequence | non_coding_transcript_exon_variant | ||
| VEP_impact | MODIFIER | ||||
| HGVSc | F40D4.14:n.162C>G | ||||
| cDNA_position | 162 | ||||
| Exon_number | 1/1 | ||||
| Reference | WBPaper00038208 | ||||
| WBPaper00004703 | |||||
| WBPaper00037807 | |||||
| Remark | Predicted SNP: Psnp=0.7699 VarS=CG | ||||
| Enzymes. Bristol-specific: [BssSI,Bst2BI]. CB4856-specific [none]. | |||||
| [20040130 db] this Locus was previously named snp_F40D4.2 | |||||
| [20040130 db] this Allele was previously named snp_F40D4.2 | |||||
| [20090224 db] original Wicks name : F40D4:5221..6261@652 Psnp=0.7699 VarS=CG | |||||
| [20090224 db] original Wicks id : eam34e10.s1@322,c,34 | |||||
| [20090224 db] Snip-SNP | |||||
| Method | SNP_Wicks |
