WormBase Tree Display for Variation: WBVar00244479

WBVar00244479 Name: Public_name: WBVar00244479
    Other_name: snp_F30F8[1]
      haw117826
      cewivar00167280
      CE09813:p.Phe486=
      F30F8.1.1:c.1458C>T
    HGVSg: CHROMOSOME_I:g.7833563G>A
  Sequence_details: SMap: S_parent: Sequence: F30F8
    Flanking_sequences: tcaatccaagtgaatcattccaaat aaccaacttctctcgcttgtctgat
    Mapping_target: F30F8
    Type_of_mutation: Substitution: G A
    SeqStatus: Sequenced
  Variation_type: SNP
    Predicted_SNP
    Natural_variant
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00004602 From_analysis: SNP_Wicks
          WGS_De_Bono
          WGS_Yanai
          Million_mutation_project_reanalysis
      WBStrain00027652 From_analysis: Million_mutation_project_reanalysis
    Laboratory: AX
    Person: WBPerson4037
    Analysis: SNP_Wicks
      WGS_De_Bono
      WGS_Yanai
      Million_mutation_project_reanalysis
    History: Acquires_merge: WBVar00537691
        WBVar01345668
    Status: Live
  Affects: Gene: WBGene00009270
    Transcript: F30F8.1.1 VEP_consequence: synonymous_variant
        VEP_impact: LOW
        HGVSc: F30F8.1.1:c.1458C>T
        HGVSp: CE09813:p.Phe486=
        cDNA_position: 1570
        CDS_position: 1458
        Protein_position: 486
        Exon_number: 9/13
        Codon_change: ttC/ttT
        Amino_acid_change: F
  Reference: WBPaper00038208
    WBPaper00004703
    WBPaper00037807
  Remark: Predicted SNP: Psnp=0.9427 VarS=AG
    Enzymes. SNP detectable only by sequencing.
    [20040130 db] this Locus was previously named snp_F30F8.1
    [20040130 db] this Allele was previously named snp_F30F8.1
    [20090224 db] original Wicks name : F30F8:6017..6906@690 Psnp=0.9427 VarS=AG
    [20090224 db] original Wicks id : hy48b03.s1@116,a,59
  Method: SNP_Wicks